RNA id: TU209121


Basic Information

Item Value
RNA id TU209121
length 1504
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G141648
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24724942 ~ 24726684 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ccgacacacacacacaccgacacaccgACACACAGCAGGAGATCAAGACGAAGCCACTTTAGAAGGTTAGTTTCAACAAACTCTTCAAACAAGCCtctagaaaaagaaaactgttgGACAAcaaatttagaaatattttagaaaatgtaattaatttataaaatattaattcattatatatgttatttttagataaatgcaACCATGctaagagttaaaaaaaatatttttttttttgaagagacagaacattaaaataatccataatTCAGCTTTTAAAGTTACACAATGACTACaatctaaaactaaaagatATTATTTAATGGATGCACATGCATAAAGGAGTGAATTTCATTTATGCACGTGCATCCAAGTTAACTCCGTTTACTACACTGCTTGGTCTTTAAGGCTCGCTCGACTCTCAGAGGCGACTGGATGCCGTCAGAGCTAAAGGAACCTGAAACTATCCTACTCAGACAGGGTAAGACACGCTCTCACATCAATGTAGCTCAAGACGAAGGGGTCCCAGATTCCAGGCTGACCGACGATCTCCTTCAGCGTCACAGAAGCCTGTCTGAAGTAGCTGTGCATCTCATGGTTGCCACCGGCTTCTTCAGTGACTGAAAACATGGACACAGAACCTCGTTTAAACTGGATGCgttgatgctaaaaaaaaaaaaccactgtGTGCGTTTGCAATACGTTTAGAGTTTcaattattttccacatactgcaCATTACTGTATCTCCCACCGGGTCGATTTGTGCACAGATTATCGTGCTAAAAAAGTGAGctgagctctgattggccggctaTCCAGTGCGCTCTGATAGGCCGAATACCCATCCagtgcgctctgattggccgaatacccaTCCagtgcgctctgattggccgaatacccaTCCagtgcgctctgattggccgaatacccaTCCagtgcgctctgattggccgaatacccaTCCagtgcgctctgattggccgaatacccaTCCAGTGCGCTCTGATAGGCCGAATACCCATCCAGTGCGCTCTGATAGGCCAAATACCTATCCagtgcgctctgattggccgaataccttaAGAGTTACGCCCCTTACTATAACGCGATGTTCACTTTTACAAAGTGTCGGCCAGAATAATAGCCCCGCCTTCTTTCTCTGCgtaaacatttgcaaataaacccactctgcgACGTTTCGGAGGGGCGTGGACTCCATCAAGAATCTCTCTTTGGTTCTGAAACTACCGTCTCCGCAACTAACGCTCCTAAGAGGAAGCTAAacttgacgcttttcccacCTCCCCCGGGCGCAGAGGGCCTCTTCCGGCACCAGATCAGGTAGTCCAGATAACCGCAGTAGCCTCGGATCAGCGTCTTCATGAGGGACTGAGCCGCCGACTGCTTGCCGTGTCTCCAGCTGTCGGCGACGGTCAGCTGCCGCTTGGCTCCGTCCAACTGCTTGTTCAGCAGGAGATGAAAGCAGTGCTCCAAACAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU209141 lncRNA downstream 32456 24692002 ~ 24692486 (-) True G141662
TU209133 lncRNA downstream 108295 24611866 ~ 24616647 (-) True LOC122325459
XR_006247301.1 lncRNA downstream 108532 24614271 ~ 24616410 (-) False LOC122325459
TU209088 lncRNA downstream 179393 24545016 ~ 24545549 (-) True G141624
TU209086 lncRNA downstream 201111 24522383 ~ 24523831 (-) True G141622
TU209124 lncRNA upstream 377 24727061 ~ 24727733 (-) True G141650
TU209158 lncRNA upstream 49931 24776615 ~ 24776863 (-) True G141676
TU209170 lncRNA upstream 61988 24788672 ~ 24788904 (-) True G141679
TU209173 lncRNA upstream 68171 24794855 ~ 24798633 (-) True G141682
TU209174 lncRNA upstream 86141 24812825 ~ 24813156 (-) True G141683
XM_043220220.1 mRNA downstream 3836 24699172 ~ 24721106 (-) True mia3
XM_043219695.1 mRNA downstream 33853 24682627 ~ 24691089 (-) True brox
XM_043219697.1 mRNA downstream 34777 24682627 ~ 24690165 (-) False brox
XM_043219698.1 mRNA downstream 42468 24678486 ~ 24682474 (-) True LOC122324924
XM_043219699.1 mRNA downstream 47318 24674210 ~ 24677624 (-) True LOC122324925
XM_043218598.1 mRNA upstream 103165 24829849 ~ 24832990 (-) True hlx1
XM_043220390.1 mRNA upstream 111968 24838652 ~ 24851779 (-) True rhpn1
XM_043220235.1 mRNA upstream 125785 24852469 ~ 24861840 (-) True naprt
XM_043220236.1 mRNA upstream 138775 24865459 ~ 24867178 (-) True c20h8orf82
XM_043218714.1 mRNA upstream 349804 25076488 ~ 25084576 (-) False tbc1d7
TU209125 other downstream 77521 24571413 ~ 24647421 (-) True G141651
TU209099 other downstream 194067 24525882 ~ 24530875 (-) False slc35b2
TU209065 other downstream 463906 24257786 ~ 24261036 (-) False LOC122324315
TU208856 other downstream 718277 24004687 ~ 24006665 (-) True G141502
XR_006247216.1 other downstream 901892 23792077 ~ 23823050 (-) False tbc1d32
TU209178 other upstream 120981 24847665 ~ 24851761 (-) False rhpn1
TU209665 other upstream 601896 25328580 ~ 25329605 (-) False wasf1
TU209701 other upstream 604242 25330926 ~ 25377416 (-) False wasf1
TU209689 other upstream 666436 25393120 ~ 25407942 (-) False mettl24
TU209680 other upstream 669524 25396208 ~ 25407942 (-) False mettl24

Expression Profile