RNA id: XM_043235095.1


Basic Information

Item Value
RNA id XM_043235095.1
length 1578
RNA type mRNA
GC content 0.53
exon number 12
gene id map2k4a
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3814881 ~ 3828692 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gagagagagagagagagagagagagagagagagagagcgagcgagcgctgttcttctgttctgtaggttgctctgctgtctgtctctgcATTGCAGCCCAGCGCTGGCTGCTGGAAGTCAAACCCAAATGGCGACGTCCAGCCCCAGCAGCACCCCAGCAGCATCAGCCTCCAGCAACAGCGCGCAGCACCACCCGACCCAGAGCCAGCACATCAGCACCATGAGCAGCATGCAAGACATCAGCTCATGCTGGAGGTTTCAGAGAGATTCAGCCCTGAAGTTAAATTTTGCCAATCCTCCAATCAAACCTACTTCCAGAATCACTCTGAACACTGCCGGACTTCCTTTCCAGAACCCACACATagagcGGCTGCGGACACACAGTATCGAGTCGTCTGGGAAGCTGAAGATCTCTCCGGAGCAGCACTGGGACTTCACAGCCGAAGACCTGAAGGACCTCGGCGAGATCGGCAGAGGAGCGTACGGCTCCGTCAACAAGATGGTGCACAAACCCAGTGGACAAATCATGGCCGTCAAAAGGATCCGGTCGACGGTAGACGAGCGAGAACAGAAGCAGCTGCTGATGGACCTGGACGTGGTCATGAGGAGCAGCGACTGTCCCTACATCGTCCAGTTTTACGGGGCTCTCTTCAGAGAGGGGGATTGCTGGATATGCATGGAGCTCATGTCTACCTCCTTCGACAAATTCTACAAATACGTTTATTCCTCTTTAGACGAAGTGATTCCAGAGGAGATTTTAGGGAAAATAACGTTAGCTACTGTGAAAGCACTTAACCActtaaaagaaaacttgaaAATTATTCACAGAGACATAAAGCCATCAAATATCCTCCTGGACAGGAAAGGCAACATTAAGCTGTGTGATTTTGGCATCAGTGGACAGCTGGTCGACTCCATCGCCAAAACCAGAGACGCGGGTTGCAGGCCGTATATGGCGccGGAGAGGATAGACCCCAGCGCATCCAGGCAGGGTTACGATGTCCGCTCAGACGTCTGGAGTTTGGGAATCACACTGTACGAGCTGGCCACGGGACGCTTCCCCTACCCGAAGTGGAACAGTGTGTTTGATCAGCTGACGCAGGTGGTGAAGGGCGACCCGCCGCAGCTCAGCAGCTCCGAGGAGAGACAGTTCTCCCCCAAATTCATCAACTTCGTCAACCTGTGCCTTACAAAGGACGAGTCAAAAAGGCCAAAGTACAAAGAGCTTCTGAAACATCCCTTCATCCAGATGTACGAGGAGCGTACGGTGGACGTGGCCAGCTACGTCTGCATGATCCTGGATCAGATGCCCGCGTCTCCCAGCTCCCCCATGTACGTCGACTGAGCGTGGGTTTAAACGTTTGCTTCATCACAGAACGGCAGTATTAAAACAGACAGGAACCCGTACACGAGAGCACCGCTCCAGCTCGACTGTAACATACCTCCCAcccacccctctctctctctgtctctctctctctctgtctctctgtctctctctgtctctctctctctctgtctctctctctctctgtctctctctctctctctgtctctctctctctctctctctgtctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250532.1 lncRNA downstream 28016 3783737 ~ 3786865 (-) True LOC122342142
TU25026 lncRNA downstream 193012 3621489 ~ 3621869 (-) True G16815
TU24978 lncRNA downstream 288033 3503008 ~ 3526848 (-) True G16779
TU24980 lncRNA downstream 289643 3475325 ~ 3525238 (-) True G16780
TU25171 lncRNA upstream 308427 4137118 ~ 4138203 (-) True G16901
TU25199 lncRNA upstream 405684 4234375 ~ 4277855 (-) True G16926
TU25205 lncRNA upstream 436520 4265211 ~ 4267492 (-) True G16930
TU25204 lncRNA upstream 438012 4266703 ~ 4267492 (-) False G16930
TU25209 lncRNA upstream 486490 4315181 ~ 4315571 (-) True G16933
XM_043235222.1 mRNA downstream 6497 3789068 ~ 3808384 (-) False elac2
XM_043235639.1 mRNA upstream 3279 3831970 ~ 3846985 (-) False LOC122341930
XM_043235636.1 mRNA upstream 3279 3831970 ~ 3846674 (-) False LOC122341930
XM_043235635.1 mRNA upstream 3279 3831970 ~ 3846394 (-) False LOC122341930
XM_043235633.1 mRNA upstream 3279 3831970 ~ 3846394 (-) False LOC122341930
XM_043235634.1 mRNA upstream 3279 3831970 ~ 3846055 (-) True LOC122341930
XR_006250494.1 other downstream 331432 3473444 ~ 3483449 (-) False LOC122341810
TU24952 other downstream 495817 3315438 ~ 3319064 (-) False LOC122333478
TU24533 other downstream 1160851 2649842 ~ 2654030 (-) True G16478
XR_006250470.1 other downstream 1174790 2631782 ~ 2640091 (-) False nup85
XR_006250471.1 other downstream 1330657 2479128 ~ 2484224 (-) True LOC122341591
XR_006250503.1 other upstream 22661 3851352 ~ 3863851 (-) False LOC122341931
TU25103 other upstream 155976 3984667 ~ 3985667 (-) False LOC122340684
TU25102 other upstream 157549 3986240 ~ 3987431 (-) False LOC122340684
TU25236 other upstream 574406 4403097 ~ 4407697 (-) True G16953
TU25544 other upstream 618689 4447380 ~ 4448881 (-) True G17131

Expression Profile