Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62650 |
| length | 1323 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 4 |
| gene id | G42351 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056704.1 |
| NCBI id | CM032073.1 |
| chromosome length | 27473687 |
| location | 3958367 ~ 3961542 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006665 | sphingolipid metabolic process | biological_process |
| GO:0006672 | ceramide metabolic process | biological_process |
| GO:0003993 | acid phosphatase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62656 | lncRNA | downstream | 628 | 3956324 ~ 3957739 (-) | False | G42354 |
| TU62654 | lncRNA | downstream | 700 | 3956214 ~ 3957667 (-) | True | G42354 |
| TU62653 | lncRNA | downstream | 700 | 3956324 ~ 3957667 (-) | False | G42354 |
| TU62622 | lncRNA | downstream | 102835 | 3853260 ~ 3855532 (-) | True | G42331 |
| TU62579 | lncRNA | downstream | 157917 | 3786837 ~ 3800450 (-) | True | LOC122346554 |
| TU62696 | lncRNA | upstream | 12555 | 3974097 ~ 3979078 (-) | True | G42390 |
| TU62699 | lncRNA | upstream | 18358 | 3979900 ~ 3980589 (-) | True | G42392 |
| TU62895 | lncRNA | upstream | 211200 | 4172742 ~ 4173892 (-) | True | G42514 |
| TU62903 | lncRNA | upstream | 222898 | 4184440 ~ 4185118 (-) | True | G42520 |
| TU62907 | lncRNA | upstream | 224822 | 4186364 ~ 4187095 (-) | True | G42522 |
| XM_043241273.1 | mRNA | downstream | 4036 | 3952528 ~ 3954331 (-) | True | cep20 |
| XM_043241249.1 | mRNA | downstream | 9690 | 3921589 ~ 3948677 (-) | False | myh11a |
| XM_043241247.1 | mRNA | downstream | 9690 | 3921589 ~ 3948677 (-) | True | myh11a |
| XM_043241250.1 | mRNA | downstream | 9690 | 3922691 ~ 3948677 (-) | False | myh11a |
| XM_043241505.1 | mRNA | downstream | 37530 | 3917437 ~ 3920837 (-) | False | pglyrp2 |
| XM_043242498.1 | mRNA | upstream | 34663 | 3996205 ~ 3999392 (-) | False | nabp1b |
| XM_043242497.1 | mRNA | upstream | 34663 | 3996205 ~ 3999392 (-) | True | nabp1b |
| XM_043241817.1 | mRNA | upstream | 38889 | 4000431 ~ 4013550 (-) | True | cavin2b |
| XM_043242853.1 | mRNA | upstream | 58146 | 4019688 ~ 4068108 (-) | True | tmeff2b |
| XM_043242854.1 | mRNA | upstream | 58146 | 4019688 ~ 4068106 (-) | False | tmeff2b |
| TU62651 | other | downstream | 4089 | 3952548 ~ 3954278 (-) | False | cep20 |
| XR_006251245.1 | other | downstream | 313963 | 3644266 ~ 3644404 (-) | True | LOC122347626 |
| XR_006251230.1 | other | downstream | 850470 | 3092540 ~ 3107897 (-) | False | cep170ab |
| XR_006251231.1 | other | downstream | 850470 | 3094790 ~ 3107897 (-) | False | cep170ab |
| TU62012 | other | downstream | 1115109 | 2840662 ~ 2843258 (-) | True | G41955 |
| unassigned_transcript_1084 | other | upstream | 38069 | 3999611 ~ 3999692 (-) | True | trnas-cga_4 |
| XR_006251246.1 | other | upstream | 406619 | 4368161 ~ 4368244 (-) | True | LOC122347627 |
| XR_006251142.1 | other | upstream | 432865 | 4394407 ~ 4415213 (-) | False | cdk15 |
| XR_006251220.1 | other | upstream | 807263 | 4768805 ~ 4774546 (-) | False | gpr155b |
| TU63298 | other | upstream | 856649 | 4818191 ~ 4825437 (-) | False | LOC122347558 |
