RNA id: XR_002651783.1



Basic Information


Item Value
RNA id XR_002651783.1
length 130
RNA type ncRNA
GC content 0.53
exon number 3
gene id LOC111195748
representative True

Chromosome Information


Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 23224605 ~ 23225055 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


GCGCTCCTCTGGGATTGAGACAGGTGCTTTAGTCTCAGACTGAGTACACTGCTCATCGTCTCTAGAGGAAGACAGgtcatcctcctcctcctcctcctcctcatcgtCTCTAGATGAAGACAGGtcatcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU281595 lncRNA downstream 125699 23095821 ~ 23098906 (-) True G207531
TU281600 lncRNA downstream 172538 23051066 ~ 23052067 (-) True G207536
TU281570 lncRNA downstream 361588 22763398 ~ 22863017 (-) False G207514
TU281572 lncRNA downstream 361588 22856643 ~ 22863017 (-) True G207514
TU281573 lncRNA downstream 361588 22860643 ~ 22863017 (-) False G207514
TU281692 lncRNA upstream 16689 23241744 ~ 23243273 (-) True G207552
TU281691 lncRNA upstream 22478 23247533 ~ 23290028 (-) True G207551
TU281701 lncRNA upstream 303380 23528435 ~ 23529136 (-) True G207557
TU281755 lncRNA upstream 677859 23902914 ~ 23903144 (-) True G207604
TU281767 lncRNA upstream 745262 23970317 ~ 23970947 (-) True G207616
XM_007228458.3 mRNA downstream 57119 23161946 ~ 23167486 (-) True olfml1
XM_022683809.1 mRNA downstream 64929 23053191 ~ 23159676 (-) False LOC103035009
XM_022683808.1 mRNA downstream 65254 23053191 ~ 23159351 (-) False LOC103035009
XM_022683810.1 mRNA downstream 65254 23055906 ~ 23159351 (-) False LOC103035009
XM_022683811.1 mRNA downstream 65255 23053191 ~ 23159350 (-) False LOC103035009
XM_022683819.1 mRNA upstream 65396 23290451 ~ 23412954 (-) True LOC103033401
XM_022683826.1 mRNA upstream 280953 23506008 ~ 23602345 (-) False LOC103047696
XM_022683825.1 mRNA upstream 280953 23506008 ~ 23602345 (-) False LOC103047696
XM_022683822.1 mRNA upstream 280953 23506008 ~ 23602345 (-) False LOC103047696
XM_022683824.1 mRNA upstream 280953 23506008 ~ 23602345 (-) False LOC103047696
XR_002651782.1 other downstream 268581 22910044 ~ 22956024 (-) False LOC103035944
XR_002651781.1 other downstream 268581 22910673 ~ 22956024 (-) False LOC103035944
TU280694 other downstream 2712461 20463703 ~ 20512144 (-) False LOC103040850
TU280695 other downstream 2712461 20463703 ~ 20512144 (-) False LOC103040850
TU280696 other downstream 2712461 20463703 ~ 20512144 (-) False LOC103040850
XR_452612.3 other upstream 713870 23938925 ~ 24020314 (-) False dnajc24
XR_002651784.1 other upstream 731291 23956346 ~ 24020314 (-) False dnajc24
XR_452613.3 other upstream 758294 23983349 ~ 24020314 (-) False dnajc24
XR_452611.3 other upstream 758294 23983349 ~ 24020314 (-) True dnajc24
TU281888 other upstream 1299679 24524734 ~ 24529067 (-) True G207707

Expression Profile