Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU22125 |
| length | 1175 |
| lncRNA type | read_through |
| GC content | 0.38 |
| exon number | 4 |
| gene id | G16343 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 3911062 ~ 3989550 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002651187.1 | lncRNA | upstream | 564400 | 3277514 ~ 3346662 (+) | True | LOC111194589 |
| TU21994 | lncRNA | upstream | 663276 | 3242898 ~ 3247786 (+) | True | G16241 |
| TU21995 | lncRNA | upstream | 663276 | 3242898 ~ 3247786 (+) | False | G16241 |
| TU21991 | lncRNA | upstream | 669475 | 3241384 ~ 3241587 (+) | True | G16239 |
| TU21989 | lncRNA | upstream | 706769 | 3203954 ~ 3204293 (+) | True | G16237 |
| TU22194 | lncRNA | downstream | 127592 | 4117142 ~ 4117476 (+) | True | G16399 |
| TU22195 | lncRNA | downstream | 129022 | 4118572 ~ 4118795 (+) | True | G16400 |
| TU22208 | lncRNA | downstream | 526447 | 4515997 ~ 4517309 (+) | True | LOC103038305 |
| TU22212 | lncRNA | downstream | 535178 | 4524728 ~ 4526329 (+) | True | G16410 |
| TU22217 | lncRNA | downstream | 545421 | 4534971 ~ 4535236 (+) | True | G16414 |
| XM_022679241.1 | mRNA | upstream | 128051 | 3614740 ~ 3783011 (+) | True | tmem132e |
| XM_007245249.3 | mRNA | upstream | 1025754 | 2868786 ~ 2885308 (+) | True | LOC103038960 |
| XM_007245250.3 | mRNA | upstream | 1025754 | 2868788 ~ 2885308 (+) | False | LOC103038960 |
| XM_007245251.3 | mRNA | upstream | 1043071 | 2836700 ~ 2867991 (+) | False | gtf2ird1 |
| XM_007245283.3 | mRNA | downstream | 8879 | 3998429 ~ 4087460 (+) | True | LOC103022138 |
| XM_022679288.1 | mRNA | downstream | 11459 | 4001009 ~ 4087460 (+) | False | LOC103022138 |
| XM_022667687.1 | mRNA | downstream | 130934 | 4120484 ~ 4122075 (+) | True | LOC111191780 |
| XM_022667716.1 | mRNA | downstream | 526851 | 4516401 ~ 4517268 (+) | False | LOC103038305 |
| XM_007236724.3 | mRNA | downstream | 730873 | 4720423 ~ 4735653 (+) | False | LOC103036617 |
| TU21431 | other | upstream | 2229040 | 1681159 ~ 1682022 (+) | True | G15839 |
| XR_002651100.1 | other | upstream | 2578271 | 1322516 ~ 1332791 (+) | False | LOC103025578 |
| XR_002651098.1 | other | upstream | 2578781 | 1322516 ~ 1332281 (+) | False | LOC103025578 |
| XR_002651096.1 | other | upstream | 3317429 | 592228 ~ 593633 (+) | True | LOC111194487 |
| TU22663 | other | downstream | 2183206 | 6172756 ~ 6177884 (+) | False | LOC103025913 |
| TU22722 | other | downstream | 2542846 | 6532396 ~ 6532868 (+) | True | G16820 |
| trnat-ugu | other | downstream | 2661155 | 6650705 ~ 6650777 (+) | True | trnat-ugu |
| trnat-ugu_1 | other | downstream | 2662430 | 6651980 ~ 6652052 (+) | True | trnat-ugu_1 |
| trnat-ugu_2 | other | downstream | 2664034 | 6653584 ~ 6653656 (+) | True | trnat-ugu_2 |
