Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU254231 |
| length | 773 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 5 |
| gene id | G187487 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 5701793 ~ 5763491 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254230 | lncRNA | upstream | 3662 | 5701793 ~ 5748505 (+) | False | G187487 |
| TU254226 | lncRNA | upstream | 111111 | 5640822 ~ 5641056 (+) | True | G187484 |
| TU254209 | lncRNA | upstream | 250291 | 5499104 ~ 5501876 (+) | True | G187477 |
| TU254207 | lncRNA | upstream | 256753 | 5494470 ~ 5495414 (+) | True | G187475 |
| TU254202 | lncRNA | upstream | 260910 | 5490085 ~ 5491257 (+) | True | G187471 |
| TU254245 | lncRNA | downstream | 33689 | 5797180 ~ 5798979 (+) | False | p3h1 |
| TU254361 | lncRNA | downstream | 122311 | 5885802 ~ 5886002 (+) | True | G187583 |
| TU254362 | lncRNA | downstream | 125342 | 5888833 ~ 5899725 (+) | True | G187584 |
| TU254390 | lncRNA | downstream | 341701 | 6105192 ~ 6178630 (+) | True | G187610 |
| TU254445 | lncRNA | downstream | 537361 | 6300852 ~ 6302587 (+) | True | G187640 |
| XM_022682302.1 | mRNA | upstream | 20823 | 5725343 ~ 5731344 (+) | True | wnt4 |
| XM_007251419.3 | mRNA | upstream | 234602 | 5508308 ~ 5517565 (+) | False | fbxo2 |
| XM_022682301.1 | mRNA | upstream | 234602 | 5508394 ~ 5517565 (+) | False | fbxo2 |
| XM_022682300.1 | mRNA | upstream | 234602 | 5511811 ~ 5517565 (+) | True | fbxo2 |
| XM_022682298.1 | mRNA | upstream | 265754 | 5472482 ~ 5486413 (+) | True | LOC103021734 |
| XM_007251413.3 | mRNA | downstream | 1958 | 5765449 ~ 5771297 (+) | True | ap5b1 |
| XM_022682303.1 | mRNA | downstream | 16400 | 5779891 ~ 5798591 (+) | True | p3h1 |
| XM_007251410.3 | mRNA | downstream | 54493 | 5817984 ~ 5835626 (+) | False | cldn19 |
| XM_007251411.3 | mRNA | downstream | 54495 | 5817986 ~ 5835626 (+) | True | cldn19 |
| XM_007251407.3 | mRNA | downstream | 478536 | 6242027 ~ 6258457 (+) | True | LOC103043936 |
| trnae-cuc_2 | other | upstream | 962120 | 4789976 ~ 4790047 (+) | True | trnae-cuc_2 |
| XR_002651654.1 | other | upstream | 1828505 | 3923452 ~ 3923662 (+) | True | LOC111195456 |
| TU253515 | other | upstream | 2357324 | 3392387 ~ 3394843 (+) | True | G186978 |
| TU253378 | other | upstream | 2750152 | 2980497 ~ 3002015 (+) | True | G186880 |
| XR_002651586.1 | other | upstream | 5213951 | 510575 ~ 538216 (+) | True | cers5 |
| XR_002651591.1 | other | downstream | 383194 | 6146685 ~ 6147519 (+) | True | LOC111195362 |
| TU254736 | other | downstream | 1329274 | 7092765 ~ 7098669 (+) | False | LOC103029365 |
| trnaq-uug_4 | other | downstream | 1428663 | 7192154 ~ 7192226 (+) | True | trnaq-uug_4 |
| TU255026 | other | downstream | 2348999 | 8112490 ~ 8113242 (+) | False | LOC111195452 |
| XR_002651599.1 | other | downstream | 2493307 | 8256798 ~ 8271689 (+) | False | agtrap |
