Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000012_09164233_09178383.mRNA |
| length | 3867 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 19 |
| gene id | CI01000012_09164233_09178383 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 9164101 ~ 9179268 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0016607 | nuclear speck | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU85326 | lncRNA | downstream | 157311 | 9006633 ~ 9006790 (-) | True | G74792 |
| TU85426 | lncRNA | downstream | 169202 | 8994610 ~ 8994899 (-) | True | G74887 |
| TU85424 | lncRNA | downstream | 170681 | 8993221 ~ 8993420 (-) | True | G74885 |
| TU85421 | lncRNA | downstream | 172855 | 8991038 ~ 8991246 (-) | True | G74882 |
| TU85342 | lncRNA | downstream | 299578 | 8862377 ~ 8864523 (-) | True | G74808 |
| TU85460 | lncRNA | upstream | 160932 | 9340200 ~ 9340405 (-) | True | G74921 |
| TU85358 | lncRNA | upstream | 295036 | 9474304 ~ 9475994 (-) | True | G74824 |
| TU85495 | lncRNA | upstream | 307999 | 9487267 ~ 9487594 (-) | True | G74953 |
| TU85496 | lncRNA | upstream | 308602 | 9487870 ~ 9488107 (-) | True | G74954 |
| TU85499 | lncRNA | upstream | 311134 | 9490402 ~ 9490617 (-) | True | G74957 |
| CI01000012_09082056_09083285.mRNA | mRNA | downstream | 80618 | 9081877 ~ 9083483 (-) | False | CI01000012_09082056_09083285 |
| CI01000012_09071892_09073410.mRNA | mRNA | downstream | 90676 | 9071491 ~ 9073425 (-) | False | CI01000012_09071892_09073410 |
| CI01000012_09068458_09070536.mRNA | mRNA | downstream | 93336 | 9068370 ~ 9070765 (-) | False | CI01000012_09068458_09070536 |
| CI01000012_09001061_09005079.mRNA | mRNA | downstream | 159022 | 9000693 ~ 9005079 (-) | False | CI01000012_09001061_09005079 |
| CI01000012_08947834_08963715.mRNA | mRNA | downstream | 200289 | 8947696 ~ 8963812 (-) | True | CI01000012_08947834_08963715 |
| CI01000012_09306970_09313413.mRNA | mRNA | upstream | 127323 | 9306591 ~ 9315713 (-) | True | CI01000012_09306970_09313413 |
| CI01000012_09358336_09370502.mRNA | mRNA | upstream | 178830 | 9358098 ~ 9370620 (-) | True | CI01000012_09358336_09370502 |
| CI01000012_09379379_09394499.mRNA | mRNA | upstream | 199883 | 9379151 ~ 9395050 (-) | True | CI01000012_09379379_09394499 |
| CI01000012_09400481_09401810.mRNA | mRNA | upstream | 221076 | 9400344 ~ 9402378 (-) | False | CI01000012_09400481_09401810 |
| CI01000012_09419200_09460604.mRNA | mRNA | upstream | 239827 | 9419095 ~ 9461288 (-) | True | CI01000012_09419200_09460604 |
| TU85337 | other | downstream | 80612 | 9082736 ~ 9083489 (-) | True | CI01000012_09082056_09083285 |
| TU85325 | other | downstream | 90644 | 9071371 ~ 9073457 (-) | True | CI01000012_09071892_09073410 |
| TU85328 | other | downstream | 93434 | 9067906 ~ 9070667 (-) | True | CI01000012_09068458_09070536 |
| TU85225 | other | downstream | 796458 | 8367081 ~ 8367643 (-) | True | G74701 |
| TU85219 | other | downstream | 796474 | 8367019 ~ 8367627 (-) | False | G74701 |
| TU85327 | other | upstream | 218808 | 9398076 ~ 9401968 (-) | True | CI01000012_09400481_09401810 |
| TU85525 | other | upstream | 396380 | 9575648 ~ 9575924 (-) | False | G74982 |
| TU85530 | other | upstream | 396380 | 9575648 ~ 9575972 (-) | False | G74982 |
| TU86281 | other | upstream | 1432647 | 10611915 ~ 10620871 (-) | False | G75608 |
| TU86282 | other | upstream | 1432647 | 10611915 ~ 10620871 (-) | True | G75608 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00011977 | True | 6259 | mRNA | 0.48 | 22 | NC_007124.7 | 30506781 ~ 30570859 (+) |
| bowfin (Amia calva) | AMCG00002983 | True | 2961 | mRNA | 0.55 | 18 | CM030139.1 | 8476692 ~ 8487793 (+) |
