Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000016_05797506_05798075.mRNA |
| length | 1933 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 2 |
| gene id | CI01000016_05797506_05798075 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 5797506 ~ 5799585 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU109256 | lncRNA | upstream | 21196 | 5776060 ~ 5776310 (+) | True | G96058 |
| TU109232 | lncRNA | upstream | 41128 | 5756097 ~ 5756378 (+) | True | G96048 |
| TU109231 | lncRNA | upstream | 41612 | 5755638 ~ 5755894 (+) | True | G96047 |
| TU109217 | lncRNA | upstream | 65043 | 5732257 ~ 5732463 (+) | True | G96035 |
| TU109216 | lncRNA | upstream | 70431 | 5726845 ~ 5727075 (+) | True | G96034 |
| TU109274 | lncRNA | downstream | 123176 | 5922761 ~ 5922984 (+) | True | G96076 |
| TU109134 | lncRNA | downstream | 124592 | 5965086 ~ 5965357 (+) | True | CI01000016_05966893_05982233 |
| TU109277 | lncRNA | downstream | 130807 | 5930392 ~ 5934791 (+) | True | G96079 |
| TU109149 | lncRNA | downstream | 184480 | 5984065 ~ 5984824 (+) | True | G95967 |
| TU109285 | lncRNA | downstream | 196913 | 5996498 ~ 5996720 (+) | True | G96087 |
| CI01000016_05698858_05706081.mRNA | mRNA | upstream | 90787 | 5698858 ~ 5706719 (+) | True | CI01000016_05698858_05706081 |
| CI01000016_05488887_05502270.mRNA | mRNA | upstream | 295156 | 5488887 ~ 5502350 (+) | False | CI01000016_05488887_05502270 |
| CI01000016_05475350_05482964.mRNA | mRNA | upstream | 313560 | 5475350 ~ 5483946 (+) | True | CI01000016_05475350_05482964 |
| CI01000016_05445824_05454816.mRNA | mRNA | upstream | 342090 | 5445824 ~ 5455416 (+) | True | CI01000016_05445824_05454816 |
| CI01000016_05405791_05407797.mRNA | mRNA | upstream | 389543 | 5405791 ~ 5407963 (+) | False | CI01000016_05405791_05407797 |
| CI01000016_05828974_05833309.mRNA | mRNA | downstream | 28813 | 5828398 ~ 5833377 (+) | True | CI01000016_05828974_05833309 |
| CI01000016_05837368_05837667.mRNA | mRNA | downstream | 36998 | 5836583 ~ 5837927 (+) | True | CI01000016_05837368_05837667 |
| CI01000016_05878037_05885761.mRNA | mRNA | downstream | 78452 | 5878037 ~ 5886192 (+) | True | CI01000016_05878037_05885761 |
| CI01000016_05891870_05892528.mRNA | mRNA | downstream | 92285 | 5891870 ~ 5892679 (+) | True | CI01000016_05891870_05892528 |
| CI01000016_05894658_05908090.mRNA | mRNA | downstream | 95073 | 5894658 ~ 5908539 (+) | True | CI01000016_05894658_05908090 |
| TU109033 | other | upstream | 389643 | 5405869 ~ 5407863 (+) | False | CI01000016_05405791_05407797 |
| TU109031 | other | upstream | 389643 | 5406748 ~ 5406829 (+) | True | G95870 |
| TU108946 | other | upstream | 571565 | 5219880 ~ 5225941 (+) | True | G95792 |
| TU108629 | other | upstream | 960851 | 4834558 ~ 4836655 (+) | True | G95503 |
| TU108786 | other | upstream | 1523601 | 4272636 ~ 4273905 (+) | True | G95648 |
| TU109637 | other | downstream | 1361056 | 7160641 ~ 7161290 (+) | True | G96389 |
| TU111256 | other | downstream | 1984480 | 7785226 ~ 7785723 (+) | True | G97766 |
| TU111320 | other | downstream | 2214778 | 8014363 ~ 8015775 (+) | True | G97824 |
| TU111822 | other | downstream | 3196513 | 8996098 ~ 9002717 (+) | True | G98288 |
| TU112665 | other | downstream | 3996046 | 9795631 ~ 9795684 (+) | True | G99016 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| mexican tetra (Astyanax mexicanus) | TU129035 | True | 7418 | lncRNA | 0.47 | 3 | NC_035906.1 | 34909775 ~ 34917378 (+) |
