RNA id: TU183851


Basic Information

Item Value
RNA id TU183851
length 255
lncRNA type inter_gene
GC content 0.21
exon number 1
gene id G161937
representative True

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 7804286 ~ 7804540 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTGAAAAGGAAAAAAAATAATATAAAGTAAACAAAAATACAAAAAATATATATCTACAAATAAATAAAAAAATAAACTAAATAAATAATAAATAAATAAATGTATACTCTCAAATAAAAAAAGTATATTGCACATTTTATTTGTTAAGAAAAAATGGGATACAGTTCTGATATCATCTGCAAAGACACAGATAACAGTAAACTGAAGCATTTAATTATTTGTGGAATCTGAAAGAGAGAGAGAAAAAAAATCCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU183850 lncRNA upstream 180 7803825 ~ 7804106 (+) True G161936
TU183848 lncRNA upstream 807 7802938 ~ 7803479 (+) False G161935
TU183846 lncRNA upstream 807 7803101 ~ 7803479 (+) True G161935
TU183849 lncRNA upstream 900 7802938 ~ 7803386 (+) False G161935
TU183845 lncRNA upstream 900 7803101 ~ 7803386 (+) False G161935
TU183864 lncRNA downstream 40952 7845492 ~ 7845741 (+) True G161949
TU183865 lncRNA downstream 41656 7846196 ~ 7846757 (+) True G161950
TU183868 lncRNA downstream 51087 7855627 ~ 7858263 (+) True G161953
TU183869 lncRNA downstream 55374 7859914 ~ 7873188 (+) True G161954
TU183871 lncRNA downstream 56642 7861182 ~ 7861688 (+) True G161956
CI01000030_07759509_07760589.mRNA mRNA upstream 43404 7758805 ~ 7760882 (+) True CI01000030_07759509_07760589
CI01000030_07738356_07746377.mRNA mRNA upstream 57840 7738356 ~ 7746446 (+) True CI01000030_07738356_07746377
CI01000030_07722943_07724722.mRNA mRNA upstream 79288 7722694 ~ 7724998 (+) False CI01000030_07722943_07724722
CI01000030_07673227_07694020.mRNA mRNA upstream 110266 7673227 ~ 7694020 (+) True CI01000030_07673227_07694020
CI01000030_07601044_07646747.mRNA mRNA upstream 156421 7601044 ~ 7647865 (+) False CI01000030_07601044_07646747
CI01000030_07804997_07807303.mRNA mRNA downstream 122 7804662 ~ 7807916 (+) True CI01000030_07804997_07807303
CI01000030_07829863_07839971.mRNA mRNA downstream 25323 7829863 ~ 7840874 (+) True CI01000030_07829863_07839971
CI01000030_07842295_07842928.mRNA mRNA downstream 37496 7842036 ~ 7842928 (+) True CI01000030_07842295_07842928
CI01000030_07868597_07886123.mRNA mRNA downstream 63752 7868292 ~ 7886228 (+) False CI01000030_07868597_07886123
CI01000030_07899071_07899829.mRNA mRNA downstream 94531 7899071 ~ 7900320 (+) True CI01000030_07899071_07899829
TU183621 other upstream 601801 7199935 ~ 7200017 (+) True G161721
TU181432 other upstream 3287179 4516778 ~ 4517107 (+) False G159816
TU181300 other upstream 3315760 4431800 ~ 4488526 (+) True G159685
TU180187 other upstream 4760513 3013456 ~ 3013518 (+) True G158703
TU179886 other upstream 5189993 2595876 ~ 2614293 (+) True G158416
TU183810 other downstream 49545 7854085 ~ 7859348 (+) True G161901
TU184054 other downstream 433425 8237965 ~ 8239604 (+) True G162088
TU183922 other downstream 740042 8544582 ~ 8548325 (+) True G161986
TU184111 other downstream 763470 8568010 ~ 8571726 (+) True G162137
TU184486 other downstream 1551863 9356403 ~ 9357014 (+) False G162449

Expression Profile