RNA id: TU283199


Basic Information

Item Value
RNA id TU283199
length 214
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G249549
representative True

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 3162614 ~ 3162827 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CGACTGTTTTTTTGTTTTGTGATGGTTGTTCATGAGTCCCTTGTTTGCTCTGAGCAGTTAAACTGAGCTCTGTTCTTCAGAAAAAATCTCCAGGTCCTGCAGATTCTTCAGATTTCAAGCATTTTTTGCATATTTGAACCCTTTACAGCAGTGACTGAATGATTTTGAGATCCATCTTTTCACACTGAGGACAGCTGAGGGACTCAAACACAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU283198 lncRNA downstream 10782 3151438 ~ 3151832 (-) True G249548
TU283178 lncRNA downstream 12242 3149992 ~ 3150372 (-) True G249529
TU283195 lncRNA downstream 15942 3146285 ~ 3146672 (-) True G249546
TU283192 lncRNA downstream 18481 3143906 ~ 3144133 (-) True G249543
TU283191 lncRNA downstream 19017 3143345 ~ 3143597 (-) True G249542
TU283161 lncRNA upstream 15777 3178604 ~ 3180979 (-) True G249512
TU283225 lncRNA upstream 31255 3194082 ~ 3194740 (-) True G249567
TU283231 lncRNA upstream 36812 3199639 ~ 3199855 (-) True G249573
TU283218 lncRNA upstream 67730 3230557 ~ 3231054 (-) True G249560
TU283210 lncRNA upstream 161939 3324766 ~ 3332555 (-) True G249555
CI01000058_03154548_03160071.mRNA mRNA downstream 2543 3154539 ~ 3160071 (-) True CI01000058_03154548_03160071
CI01000058_03136045_03137264.mRNA mRNA downstream 25350 3135699 ~ 3137264 (-) True CI01000058_03136045_03137264
CI01000058_03128328_03131680.mRNA mRNA downstream 30752 3128275 ~ 3131862 (-) True CI01000058_03128328_03131680
CI01000058_03112748_03117231.mRNA mRNA downstream 45383 3112232 ~ 3117231 (-) True CI01000058_03112748_03117231
CI01000058_02863488_02874502.mRNA mRNA downstream 287954 2863257 ~ 2874660 (-) False CI01000058_02863488_02874502
CI01000058_03239666_03330001.mRNA mRNA upstream 76839 3239666 ~ 3330001 (-) False CI01000058_03239666_03330001
CI01000058_03668662_03671701.mRNA mRNA upstream 505719 3668546 ~ 3672185 (-) True CI01000058_03668662_03671701
CI01000058_03684461_03827727.mRNA mRNA upstream 521634 3684461 ~ 3827727 (-) False CI01000058_03684461_03827727
CI01000058_03904018_03906800.mRNA mRNA upstream 741070 3903897 ~ 3908108 (-) True CI01000058_03904018_03906800
CI01000058_03950901_03956376.mRNA mRNA upstream 788074 3950901 ~ 3956376 (-) True CI01000058_03950901_03956376
TU282944 other downstream 301421 2858483 ~ 2861193 (-) True CI01000058_02859435_02860658
TU281026 other downstream 2507665 646443 ~ 654949 (-) True G247592
TU283989 other upstream 525816 3688643 ~ 3696711 (-) True G250230

Expression Profile