RNA id: CI01000059_00047317_00051846.mRNA


Basic Information

Item Value
RNA id CI01000059_00047317_00051846.mRNA
length 547
RNA type mRNA
GC content 0.41
exon number 3
gene id CI01000059_00047317_00051846
representative True

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 47278 ~ 51883 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAATAAAAGAAAGACTCAATTCTAATTTTTTAACTAAACATGGACAAAACTGAGATCATTATTGTTGGAACTCCATCACACACTAGCAATATTCCTACTGATTTTGCATGTGCAATATATCTGCATGACTGTCCAAAGCAGCCCTATATTCCCATCTATCTGCTGGTGTCAGGTGTGTTTGCATTGGTGCTCGGTCTGTTGTCCTGCCTTCCATGCACTCAGGAGCCAGAAGATGGCACTCAAACTCCTCTGAGTAGTCTCTGCACTGCCTGGAATTCACTTGTTTCCCTTTTCCTCTTCTGCTGGTTCATTGCTGGTAATGTATGGATCTACTCTATTTACCAGCCTAATTACATTGGCACCGATTATTGCAATAAGACACTGTACCTGTTTGCTTTCTGGACTACCACATTGGTCTATATATTGCTGGGCATTGTCTTCTTAGTCGGTTGCTGTATGTTATTCTGCCTGTGTTTGTGTGGAAGGAGTGGAAATGTGGATGACGTATGATAGACAGGGCCAGCAGTCAACAGTAATATTACTAATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU284580 lncRNA downstream 69978 121861 ~ 122074 (+) True G250744
TU284539 lncRNA downstream 77130 129013 ~ 131899 (+) True G250703
TU284573 lncRNA downstream 101069 152952 ~ 153326 (+) True G250737
TU284552 lncRNA downstream 101593 153476 ~ 155433 (+) True G250716
TU284611 lncRNA downstream 182694 234577 ~ 234803 (+) True G250775
CI01000059_00067936_00068888.mRNA mRNA downstream 16053 67936 ~ 69097 (+) True CI01000059_00067936_00068888
CI01000059_00071798_00072160.mRNA mRNA downstream 19915 71798 ~ 72224 (+) True CI01000059_00071798_00072160
CI01000059_00119105_00128880.mRNA mRNA downstream 67150 119033 ~ 128932 (+) True CI01000059_00119105_00128880
CI01000059_00176745_00183438.mRNA mRNA downstream 124822 176705 ~ 183693 (+) True CI01000059_00176745_00183438
CI01000059_00265853_00270206.mRNA mRNA downstream 213970 265853 ~ 270772 (+) True CI01000059_00265853_00270206
TU284955 other downstream 926858 978741 ~ 979218 (+) False G251046
TU284957 other downstream 926858 978741 ~ 979096 (+) True G251046
TU284915 other downstream 1012986 1064869 ~ 1067357 (+) True G251017
TU285191 other downstream 1575883 1627766 ~ 1661390 (+) True G251249
TU286110 other downstream 2016661 2069478 ~ 2069578 (+) True G252061

Expression Profile