CI01000059_00071798_00072160


Basic Information

Item Value
gene id CI01000059_00071798_00072160
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 71798 ~ 72224 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_00071798_00072160.mRNA
GTGGAGGAGTCTGCTTATTCGCTGGCTCGGTGTAAGCTGGAGAATCTTCTCAATAAGAGCATGAGGATTCGGATGACAGACGGGCGCACGCTGGTGGGGCTCTTCCTGTGCACAGACCGAGACTGCAACGTCATCCTGGGATCTGCACAAGAATTCCTCAAATCCACAGTGTCACTTTATTGTCAACTATTGCTTTATATTGTCAGAAATTTGAATTACAACTATAATTATTTAACTTACCAGCTTACCACAAACTGTTGGTGCTATGGATGCTTTAACAGTAAAAAAGCTCACAGGTAAGCTGGTAAGTTTAATAATTATAGTTGTGATTCAAATTTCTTACAATATAAAGCAATAGTTGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_00071798_00072160.mRNA True 364 mRNA 0.40 2 71798 72224

Neighbor

gene id symbol gene type direction distance location
CI01000059_00067936_00068888 NA coding upstream 2701 67936 ~ 69097 (+)
CI01000059_00047317_00051846 NA coding upstream 19915 47278 ~ 51883 (+)
CI01000059_00119105_00128880 NA coding downstream 46809 119033 ~ 128932 (+)
CI01000059_00176745_00183438 RANGRF coding downstream 104481 176705 ~ 183693 (+)
CI01000059_00265853_00270206 BSPRY coding downstream 193629 265853 ~ 270772 (+)
CI01000059_00293442_00308109 TRAF2B, TRAF2 coding downstream 221218 293442 ~ 309217 (+)
CI01000059_00338849_00339271 TMEM203 coding downstream 266625 338849 ~ 339616 (+)
G250744 NA non-coding downstream 49637 121861 ~ 122074 (+)
G250703 NA non-coding downstream 56789 129013 ~ 131899 (+)
G250737 NA non-coding downstream 80728 152952 ~ 153326 (+)
G250716 NA non-coding downstream 81252 153476 ~ 155433 (+)
G250775 NA non-coding downstream 162353 234577 ~ 234803 (+)
G251046 NA other downstream 906517 978741 ~ 979218 (+)
G251017 NA other downstream 992645 1056252 ~ 1067357 (+)
G251249 NA other downstream 1555542 1627766 ~ 1661390 (+)
CI01000059_02068570_02070710 NA other downstream 1996320 2068544 ~ 2071924 (+)
CI01000059_02133197_02134625 NA other downstream 2059268 2133003 ~ 2135347 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030459 naa38 coding NC_007116.7 CM002889.2 53876169 ~ 53908674 (+)
bowfin (Amia calva) AMCG00011718 naa38,lsmd1 misc CM030138.1 CM030138.1 2852817 ~ 2858284 (+)