RNA id: TU323983


Basic Information

Item Value
RNA id TU323983
length 322
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G285856
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 1893345 ~ 1893666 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGCAAGGATAAAGGAGCACAAGGAGATCAGGGAGACGATGAAGACGGGACTGAAAACTACAAGACAGAGCACAAGGGAGGATGAGAGGTCAGCGTTTTCCCTCAACATCCGTCCATGACTTAATCTTATAGAGCTCTGAGACGGAGACCTTCCCAGGGACACGACCGCACTACGACAGGGGAGGATGAGAGAGAGGAAGAAAAAGGATGTGCAGATTATGGTCCTGCGAGGCCCCGGGGCACCAGCCTCTTTGGAGGTCCCCTTTTGTCACAGTGAGATGTAATGAGAAATGATACGGCAAATATGAGAAATAAAGTGGCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU323982 lncRNA downstream 598 1892505 ~ 1892747 (-) True G285855
TU323975 lncRNA downstream 12524 1880599 ~ 1880821 (-) True G285848
TU323973 lncRNA downstream 16163 1876938 ~ 1877182 (-) True G285846
TU323972 lncRNA downstream 28721 1864346 ~ 1864624 (-) True G285845
TU323947 lncRNA downstream 48090 1835648 ~ 1845255 (-) True G285821
TU323990 lncRNA upstream 15462 1909128 ~ 1909363 (-) True G285863
TU323994 lncRNA upstream 20453 1914119 ~ 1914497 (-) True G285867
TU323996 lncRNA upstream 21315 1914981 ~ 1915686 (-) True CI01000072_01901888_01919435
TU323997 lncRNA upstream 34988 1928654 ~ 1928883 (-) True G285870
TU323891 lncRNA upstream 40402 1934068 ~ 1935773 (-) True G285765
CI01000072_01854562_01862622.mRNA mRNA downstream 30657 1854334 ~ 1862688 (-) True CI01000072_01854562_01862622
CI01000072_01826415_01834432.mRNA mRNA downstream 58898 1826325 ~ 1834447 (-) True CI01000072_01826415_01834432
CI01000072_01816759_01818078.mRNA mRNA downstream 75000 1816724 ~ 1818345 (-) True CI01000072_01816759_01818078
CI01000072_01792476_01805286.mRNA mRNA downstream 87633 1792073 ~ 1805712 (-) True CI01000072_01792476_01805286
CI01000072_01596829_01610605.mRNA mRNA downstream 282485 1596783 ~ 1610860 (-) False CI01000072_01596829_01610605
CI01000072_01901888_01919435.mRNA mRNA upstream 7258 1900924 ~ 1919473 (-) False CI01000072_01901888_01919435
CI01000072_01946903_01949124.mRNA mRNA upstream 51622 1945288 ~ 1949124 (-) True CI01000072_01946903_01949124
CI01000072_01973002_01985111.mRNA mRNA upstream 79230 1972896 ~ 1985244 (-) True CI01000072_01973002_01985111
CI01000072_01987945_01988280.mRNA mRNA upstream 93608 1987274 ~ 1988773 (-) True CI01000072_01987945_01988280
CI01000072_02041267_02050950.mRNA mRNA upstream 147072 2040738 ~ 2053184 (-) True CI01000072_02041267_02050950
TU323812 other downstream 265450 1602289 ~ 1602443 (-) True G285697
TU323815 other downstream 265450 1594111 ~ 1627895 (-) True CI01000072_01596829_01610605
TU323625 other downstream 538413 1335507 ~ 1354932 (-) True G285534
TU322054 other downstream 1609066 283623 ~ 283764 (-) True G284127
TU323892 other upstream 111885 2005551 ~ 2008309 (-) True G285766
TU323875 other upstream 274382 2168048 ~ 2170658 (-) True G285752
TU324139 other upstream 1100103 2993769 ~ 2999495 (-) True G286005
TU324361 other upstream 2076604 3970270 ~ 3976002 (-) False G286205
TU324366 other upstream 2076604 3970270 ~ 3976067 (-) False G286205

Expression Profile