RNA id: TU328095


Basic Information

Item Value
RNA id TU328095
length 283
lncRNA type antisense_over
GC content 0.52
exon number 2
gene id G289280
representative False

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 1190069 ~ 1199582 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CGTTGAGAGCTTTGCTGTAGCGCTCGATTGTCTTATTAAGTTCCCGCTGGGTGTCCTGTATCTCGCTGAGCTCACTGCGTGTCTGGTCCATCTCGTCCTGAGATGTTTTGAGCAGTTTGAGGATGCTGTCTAGCTTGGCTTTTCCAGCACGCAGACTCTCTTCCAGACGCTGCTCCTCTTGTTCAAGACAGTACAGGTCCGTCTTCGTTCTGCTCATCTCCTTCTCCTGCGTCTGCATGTCTGACTCCTGAGACACGATCTGAGTCTGCAGCGATGTGATCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU328112 lncRNA upstream 25530 1164313 ~ 1164539 (+) True G289297
TU328111 lncRNA upstream 26023 1163746 ~ 1164046 (+) True G289296
TU328110 lncRNA upstream 27142 1162695 ~ 1162927 (+) True G289295
TU328105 lncRNA upstream 48672 1140848 ~ 1141397 (+) True G289290
TU328098 lncRNA upstream 82702 1107164 ~ 1107367 (+) True G289283
TU328117 lncRNA downstream 287 1191398 ~ 1191728 (+) True G289302
TU328124 lncRNA downstream 27248 1218359 ~ 1267559 (+) False G289309
TU328127 lncRNA downstream 39378 1230489 ~ 1267559 (+) True G289309
TU328172 lncRNA downstream 80675 1271786 ~ 1272046 (+) True G289351
TU328155 lncRNA downstream 104198 1295309 ~ 1317045 (+) True G289334
CI01000075_01159479_01160597.mRNA mRNA upstream 29406 1159479 ~ 1160663 (+) True CI01000075_01159479_01160597
CI01000075_01033320_01042574.mRNA mRNA upstream 146374 1033220 ~ 1043695 (+) True CI01000075_01033320_01042574
CI01000075_01015651_01022674.mRNA mRNA upstream 167256 1015651 ~ 1022813 (+) True CI01000075_01015651_01022674
CI01000075_00917306_00921588.mRNA mRNA upstream 268349 917306 ~ 921720 (+) False CI01000075_00917306_00921588
CI01000075_00877796_00880322.mRNA mRNA upstream 309625 877796 ~ 880444 (+) True CI01000075_00877796_00880322
CI01000075_01364135_01365758.mRNA mRNA downstream 173024 1364135 ~ 1365843 (+) False CI01000075_01364135_01365758
CI01000075_01404076_01444348.mRNA mRNA downstream 212965 1404076 ~ 1444410 (+) False CI01000075_01404076_01444348
CI01000075_01451280_01460210.mRNA mRNA downstream 260169 1451280 ~ 1461636 (+) True CI01000075_01451280_01460210
CI01000075_01466937_01467865.mRNA mRNA downstream 275826 1466937 ~ 1468061 (+) True CI01000075_01466937_01467865
CI01000075_01506719_01516006.mRNA mRNA downstream 315099 1506210 ~ 1516053 (+) False CI01000075_01506719_01516006
TU327648 other upstream 267653 917501 ~ 922416 (+) False CI01000075_00917306_00921588
TU327647 other upstream 267653 917914 ~ 922416 (+) True CI01000075_00917306_00921588
TU327465 other upstream 882148 305108 ~ 307921 (+) False G288755
TU327394 other upstream 952798 235398 ~ 237271 (+) True G288708
TU328138 other downstream 137675 1328786 ~ 1363443 (+) True G289317
TU328137 other downstream 162381 1353492 ~ 1363443 (+) False G289317
TU328135 other downstream 171228 1362339 ~ 1363443 (+) True G289317
TU328149 other downstream 192932 1384043 ~ 1397668 (+) True G289328
TU328140 other downstream 409070 1600181 ~ 1605306 (+) True G289319

Expression Profile