RNA id: CI01000112_02275641_02277644.mRNA



Basic Information


Item Value
RNA id CI01000112_02275641_02277644.mRNA
length 1282
RNA type mRNA
GC content 0.34
exon number 2
gene id CI01000112_02275641_02277644
representative True

Chromosome Information


Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2275641 ~ 2278611 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAAATGGGAGCATACTTCACTACCAGTAATAAAGAGACTGTGAACAAGAGTGATGTTCTCTTCCTTGCGGTCAAGCCACATATCATTCCCTTCGTTTTGGATGAGATCGGGCCAGACATCGAAGACCGCCATCTCATTGTCTCTTGTGCAGCAGGAGTCACGATCAGCTCCATAGAAAAGGGAGCTTCAGTACTTGGCAGACCAAGAGAAGATTTCTCCTGCCGCCATAAAGAAGACTACTTTGGACAAGGTGCTTCAGCAGCCAGGTGTCACGACAACAGGGGTCGGGGTCAGGACTGGCCTCAACCTCTTTAACAGCACCAACCCCAGGACTAAGTTGTTTAAAAAATAAAATGACATGAAATGACAATGGATTTTTTAAAAAAAAAATTTATTCACCATTCAATTTTTAGGCTTCAAGATTTTTTTTTTTTTTAACCAAGCTATGTTCAAAGATGATTCTCAACTACGGTATGAAAGATATAATGGGATTAATTGATATACCATTTTAATTTTTTGCAATATGTGGGTAAAAATAGTCATACATGAGTTTTCCCATTCAATACAATGCATCTATACACTGTTTCTAATTTGCATATTAATGTGTTCTTGGGGCAACATGTAATGAAAAAAGAAGTGTAATAATGGGAGTATTAATTGGCAAAATGTTCATAATAATATCTAATAATTAATAAGAATATTGTATATATAATTTCTTTCGCTATTCGCTTGTTGTGTCTCCCAAATTGCCTGATAAACAAGTCCTGGTGTCCTCTACAGTGGACATGCATAAAATGAATGCCCTGTTTTGTAAAAGAAAGTCATATTTTGATTAGAAACCCCATAATATTTTCCCGAGATGTTGATTTATAACAAACAATTTAAAAGATAATCCGATTTAAATGATCGGATTATGATATAAAATAATTATAAAATATTATCATATTTCCATAAAAGTGCTAATTTTGATCATTAAATTAATGTCAGTCGTATTTAAAGACCAAGGAGTTGTTGTTGTCATTGTGAAACCTCCAAAAATTTGGTATCTCTGCAAAGCCCTGAATGTGCTCATTACAGGACTCCTGAGTTAAAACTGTGACATGTATGATGTGATTTTGACTGCTAATTAATCGTGACATTATTTAAAAAGTGATCTGATTCCAGACCAGAAAGTGGTCTGATTCACTGATCACATCTGAAATCTAATTATAGCTCAAAAGTGTTTTGTTATTAATTTGTTTAAATACTACTGTCTGTTTAATGTGATACTATTTTGAAAATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU373870 lncRNA upstream 27233 2245982 ~ 2248408 (+) True G328925
TU373869 lncRNA upstream 29280 2243368 ~ 2246361 (+) False G328925
TU373873 lncRNA upstream 32457 2241872 ~ 2243184 (+) True G328926
TU373943 lncRNA upstream 92199 2182904 ~ 2183442 (+) True G328989
TU373942 lncRNA upstream 94008 2181408 ~ 2181633 (+) True G328988
TU373989 lncRNA downstream 4078 2282689 ~ 2282910 (+) True G329025
TU374043 lncRNA downstream 131884 2410495 ~ 2410720 (+) True G329079
TU374044 lncRNA downstream 133800 2412411 ~ 2412713 (+) True G329080
TU374031 lncRNA downstream 145231 2423842 ~ 2425198 (+) True G329067
TU374065 lncRNA downstream 263056 2541667 ~ 2542297 (+) True G329098
CI01000112_02261335_02262540.mRNA mRNA upstream 12860 2261335 ~ 2262781 (+) True CI01000112_02261335_02262540
CI01000112_02240184_02240792.mRNA mRNA upstream 34398 2237669 ~ 2241243 (+) True CI01000112_02240184_02240792
CI01000112_02207728_02210655.mRNA mRNA upstream 64684 2207690 ~ 2210957 (+) True CI01000112_02207728_02210655
CI01000112_02109843_02114079.mRNA mRNA upstream 161078 2109843 ~ 2114563 (+) True CI01000112_02109843_02114079
CI01000112_02060950_02068272.mRNA mRNA upstream 207037 2060721 ~ 2068604 (+) True CI01000112_02060950_02068272
CI01000112_02295987_02301298.mRNA mRNA downstream 17288 2295899 ~ 2302593 (+) True CI01000112_02295987_02301298
CI01000112_02454665_02459341.mRNA mRNA downstream 176019 2454630 ~ 2459341 (+) True CI01000112_02454665_02459341
CI01000112_02466191_02472040.mRNA mRNA downstream 187580 2466191 ~ 2472567 (+) True CI01000112_02466191_02472040
CI01000112_02483013_02484955.mRNA mRNA downstream 204402 2483013 ~ 2485133 (+) True CI01000112_02483013_02484955
CI01000112_02503439_02516455.mRNA mRNA downstream 224261 2502872 ~ 2516636 (+) True CI01000112_02503439_02516455
TU373329 other upstream 1042523 1232022 ~ 1233118 (+) True G328456
TU374096 other downstream 339093 2617704 ~ 2618151 (+) False G329125
TU374097 other downstream 339093 2617704 ~ 2618151 (+) False G329125
TU374098 other downstream 339093 2617704 ~ 2618151 (+) True G329125
TU374184 other downstream 641643 2920254 ~ 2931889 (+) True G329194
TU375960 other downstream 2806109 5084720 ~ 5096971 (+) True G330755

Expression Profile