RNA id: TU436752


Basic Information

Item Value
RNA id TU436752
length 226
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G382036
representative True

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 3712227 ~ 3712452 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TATTTGTATAGCGCTTTTCACGATACATATCGTTTCAAAGCGGCTTTACAGAGAATGCATGTCAACATTACAATTTAGAGAATGCAGTTAGCTAATAATGTAATAATTTAGGCAATTTAATTTACAATCACTGTTAGCAGTTTAATTGAAGGTAGAAGCAATGAGCTCCTGGAAATAATGAATTACATATTAACAACAATTAGGATATATAGAAATTTGGGAATGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU436680 lncRNA downstream 14530 3696886 ~ 3697697 (-) True G381978
TU436711 lncRNA downstream 24948 3638729 ~ 3687279 (-) True G382003
TU436705 lncRNA downstream 91138 3620874 ~ 3621089 (-) True G381998
TU436557 lncRNA downstream 208262 3502618 ~ 3503965 (-) True G381867
TU436661 lncRNA downstream 221597 3490418 ~ 3490630 (-) True G381961
TU436815 lncRNA upstream 39270 3751722 ~ 3752001 (-) True G382093
TU436816 lncRNA upstream 43266 3755718 ~ 3755924 (-) True G382094
TU436771 lncRNA upstream 187039 3899491 ~ 4044999 (-) False G382051
TU436760 lncRNA upstream 253124 3965576 ~ 3976937 (-) True G382044
TU436770 lncRNA upstream 328089 4040541 ~ 4044999 (-) True G382051
CI01000189_03699588_03706531.mRNA mRNA downstream 5393 3699248 ~ 3706834 (-) True CI01000189_03699588_03706531
CI01000189_03608917_03613975.mRNA mRNA downstream 98252 3608235 ~ 3613975 (-) True CI01000189_03608917_03613975
CI01000189_03557950_03558676.mRNA mRNA downstream 153551 3557808 ~ 3558676 (-) True CI01000189_03557950_03558676
CI01000189_03546199_03556875.mRNA mRNA downstream 155352 3546199 ~ 3556875 (-) True CI01000189_03546199_03556875
CI01000189_03517928_03524647.mRNA mRNA downstream 187515 3517283 ~ 3524712 (-) True CI01000189_03517928_03524647
CI01000189_03903426_03904603.mRNA mRNA upstream 190482 3902934 ~ 3904603 (-) True CI01000189_03903426_03904603
CI01000189_03950993_03958722.mRNA mRNA upstream 237721 3950173 ~ 3958722 (-) True CI01000189_03950993_03958722
CI01000189_03980640_03981210.mRNA mRNA upstream 268161 3980613 ~ 3981210 (-) True CI01000189_03980640_03981210
CI01000189_03983572_04013988.mRNA mRNA upstream 269914 3982366 ~ 4014133 (-) True CI01000189_03983572_04013988
CI01000189_04017195_04030340.mRNA mRNA upstream 304569 4017021 ~ 4030340 (-) True CI01000189_04017195_04030340
TU435927 other downstream 705783 2998873 ~ 3006444 (-) True G381317
TU435899 other downstream 748773 2959108 ~ 2961667 (-) True G381299
TU434639 other downstream 2813787 894220 ~ 898440 (-) True G380177
TU434342 other downstream 2946850 753257 ~ 764109 (-) True G379912
TU436781 other upstream 118175 3830627 ~ 3832613 (-) True G382060
TU436773 other upstream 173110 3885562 ~ 3892909 (-) True G382052
TU436879 other upstream 433138 4145590 ~ 4146084 (-) True G382153

Expression Profile