RNA id: TU436863



Basic Information


Item Value
RNA id TU436863
length 224
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G382137
representative True

Chromosome Information


Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 4053269 ~ 4053492 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTATTCCGCCATATTGCGCGTTGCACTTTTTCCCATTCAAAACAATACGAGTGACGCGTCTTGTGTTATTCTATAGACCTTATTTACCAGAGATGGCGCCGCCATCTTTAGAATGTTGTCTTTTAACTTCCGTTTTTGCGGTAGCTCTGTATATTTCTATGGCATCGCTGTTGAAGAATAATTAGCTGGTGAAGTGGATTTACCTGTTGTAGAGTTAATGAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU436862 lncRNA downstream 3716 4049313 ~ 4049553 (-) True G382136
TU436861 lncRNA downstream 4041 4048885 ~ 4049228 (-) True G382135
TU436860 lncRNA downstream 4902 4047949 ~ 4048367 (-) True G382134
TU436859 lncRNA downstream 5706 4047263 ~ 4047563 (-) True G382133
TU436858 lncRNA downstream 7573 4045237 ~ 4045696 (-) True G382132
TU436894 lncRNA upstream 119027 4172519 ~ 4178416 (-) True G382166
TU436952 lncRNA upstream 288616 4342108 ~ 4346215 (-) True G382201
TU436944 lncRNA upstream 482066 4535558 ~ 4540944 (-) False G382198
TU436942 lncRNA upstream 487696 4541188 ~ 4567288 (-) False G382198
TU436943 lncRNA upstream 487696 4541188 ~ 4567288 (-) True G382198
CI01000189_04017195_04030340.mRNA mRNA downstream 22929 4017021 ~ 4030340 (-) True CI01000189_04017195_04030340
CI01000189_03983572_04013988.mRNA mRNA downstream 39136 3982366 ~ 4014133 (-) True CI01000189_03983572_04013988
CI01000189_03980640_03981210.mRNA mRNA downstream 72059 3980613 ~ 3981210 (-) True CI01000189_03980640_03981210
CI01000189_03950993_03958722.mRNA mRNA downstream 94547 3950173 ~ 3958722 (-) True CI01000189_03950993_03958722
CI01000189_03903426_03904603.mRNA mRNA downstream 148666 3902934 ~ 3904603 (-) True CI01000189_03903426_03904603
CI01000189_04058639_04097730.mRNA mRNA upstream 4434 4057926 ~ 4097730 (-) True CI01000189_04058639_04097730
CI01000189_04120947_04130707.mRNA mRNA upstream 66845 4120337 ~ 4130707 (-) True CI01000189_04120947_04130707
CI01000189_04271632_04393877.mRNA mRNA upstream 218140 4271632 ~ 4393877 (-) True CI01000189_04271632_04393877
CI01000189_04432088_04472364.mRNA mRNA upstream 378442 4431934 ~ 4472706 (-) True CI01000189_04432088_04472364
CI01000189_04572894_04573508.mRNA mRNA upstream 519367 4572859 ~ 4573653 (-) True CI01000189_04572894_04573508
TU436773 other downstream 160360 3885562 ~ 3892909 (-) True G382052
TU436781 other downstream 220656 3830627 ~ 3832613 (-) True G382060
TU435927 other downstream 1046825 2998873 ~ 3006444 (-) True G381317
TU435899 other downstream 1089815 2959108 ~ 2961667 (-) True G381299
TU434639 other downstream 3154829 894220 ~ 898440 (-) True G380177
TU436879 other upstream 92098 4145590 ~ 4146084 (-) True G382153

Expression Profile