RNA id: TU512279


Basic Information

Item Value
RNA id TU512279
length 456
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G446259
representative True

Chromosome Information

Item Value
chromosome id CI01000314
NCBI id null
chromosome length 1736912
location 1692206 ~ 1692661 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCTTCTGCTGCTGTAGCTCATTTGCTTCAAGGCTTGACGTGTTGTGCGTTCAGTGATGCTCTTCTGCAGACCTCGATTGTAATGAGTGGATATTTGATTTACTGTTGCCTTTCTATCAGCTCAAACCAGTCTGGCCTTTCTCCTCTGACCTCAACAAGGCATTTTCACCAACAGAACTGCCACTCAATGGATATTTTCTCTTTTTCTGACCATTCTCTGTAAACCCTAGAGATGGTTGTGTGTGAAAATCCCAGTAGATCAGCAGTTTCTGAAATACTCAGACTAGCCCGTCTGGCACCAACAACCATGGCACGTTCTCTTAAATCACCTTTCCACCCCATTCTGATGATCAGTTTGAACTTGTCTTGTCTTGACCATGTCTACATGCATTGAGTTGCTGCCATGTGATTGGCTGACTGAATATTTGCGTTAATGAGCAGTCAAACAGGTGTACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU512276 lncRNA upstream 8063 1683933 ~ 1684143 (+) True G446256
TU512220 lncRNA upstream 68602 1616923 ~ 1623604 (+) False G446209
TU512218 lncRNA upstream 73475 1616923 ~ 1618731 (+) False G446209
TU512222 lncRNA upstream 73475 1616923 ~ 1618731 (+) True G446209
TU512245 lncRNA upstream 128224 1563590 ~ 1563982 (+) True G446227
TU512181 lncRNA downstream 29559 1722220 ~ 1724903 (+) True G446181
CI01000314_01635113_01658762.mRNA mRNA upstream 33444 1635113 ~ 1658762 (+) True CI01000314_01635113_01658762
CI01000314_01398459_01474471.mRNA mRNA upstream 217735 1398459 ~ 1474471 (+) True CI01000314_01398459_01474471
CI01000314_01334065_01347608.mRNA mRNA upstream 343896 1334065 ~ 1348310 (+) True CI01000314_01334065_01347608
CI01000314_01238763_01250499.mRNA mRNA upstream 441125 1238621 ~ 1251081 (+) True CI01000314_01238763_01250499
CI01000314_01096672_01145574.mRNA mRNA upstream 546610 1096672 ~ 1145596 (+) True CI01000314_01096672_01145574
CI01000314_01695225_01696495.mRNA mRNA downstream 2564 1695225 ~ 1696499 (+) True CI01000314_01695225_01696495
CI01000314_01700805_01709471.mRNA mRNA downstream 8144 1700805 ~ 1709537 (+) True CI01000314_01700805_01709471
CI01000314_01716386_01722096.mRNA mRNA downstream 23438 1716099 ~ 1722096 (+) True CI01000314_01716386_01722096
TU511312 other upstream 1379185 311532 ~ 313021 (+) True G445422

Expression Profile