Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000321_03937712_03954703.mRNA |
| length | 4985 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 10 |
| gene id | CI01000321_03937712_03954703 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 3937432 ~ 3955589 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU525610 | lncRNA | upstream | 98900 | 3838307 ~ 3838532 (+) | True | G457878 |
| TU525592 | lncRNA | upstream | 131921 | 3803006 ~ 3805511 (+) | True | CI01000321_03795430_03804685 |
| TU525606 | lncRNA | upstream | 198839 | 3736446 ~ 3738593 (+) | True | G457874 |
| TU525603 | lncRNA | upstream | 205322 | 3722749 ~ 3732110 (+) | True | G457872 |
| TU525590 | lncRNA | upstream | 241227 | 3692881 ~ 3696205 (+) | True | G457859 |
| TU527061 | lncRNA | downstream | 143432 | 4099021 ~ 4102339 (+) | True | G459126 |
| TU527121 | lncRNA | downstream | 280915 | 4236504 ~ 4236726 (+) | True | G459178 |
| TU527123 | lncRNA | downstream | 293017 | 4248606 ~ 4248923 (+) | True | G459180 |
| TU527124 | lncRNA | downstream | 293480 | 4249069 ~ 4249296 (+) | True | G459181 |
| TU527125 | lncRNA | downstream | 294642 | 4250231 ~ 4250465 (+) | True | G459182 |
| CI01000321_03898978_03936261.mRNA | mRNA | upstream | 1171 | 3898978 ~ 3936261 (+) | True | CI01000321_03898978_03936261 |
| CI01000321_03820289_03828024.mRNA | mRNA | upstream | 108660 | 3820124 ~ 3828772 (+) | True | CI01000321_03820289_03828024 |
| CI01000321_03811184_03815473.mRNA | mRNA | upstream | 121801 | 3810295 ~ 3815631 (+) | True | CI01000321_03811184_03815473 |
| CI01000321_03795430_03804685.mRNA | mRNA | upstream | 132697 | 3795301 ~ 3804735 (+) | False | CI01000321_03795430_03804685 |
| CI01000321_03767896_03783640.mRNA | mRNA | upstream | 153506 | 3767896 ~ 3783926 (+) | True | CI01000321_03767896_03783640 |
| CI01000321_03981145_03984891.mRNA | mRNA | downstream | 25556 | 3981145 ~ 3984984 (+) | True | CI01000321_03981145_03984891 |
| CI01000321_03989853_03999565.mRNA | mRNA | downstream | 34140 | 3989729 ~ 4001036 (+) | True | CI01000321_03989853_03999565 |
| CI01000321_04013470_04014515.mRNA | mRNA | downstream | 57881 | 4013470 ~ 4015412 (+) | False | CI01000321_04013470_04014515 |
| CI01000321_04022562_04030274.mRNA | mRNA | downstream | 66973 | 4022562 ~ 4030336 (+) | True | CI01000321_04022562_04030274 |
| CI01000321_04063726_04074390.mRNA | mRNA | downstream | 107102 | 4062691 ~ 4074493 (+) | True | CI01000321_04063726_04074390 |
| TU525588 | other | upstream | 134550 | 3789318 ~ 3789972 (+) | True | G457857 |
| TU524456 | other | upstream | 3114585 | 818464 ~ 822847 (+) | True | G456881 |
| TU524336 | other | upstream | 3510407 | 426083 ~ 427025 (+) | True | G456774 |
| TU527032 | other | downstream | 51037 | 4006626 ~ 4009532 (+) | False | G459103 |
| TU527033 | other | downstream | 51074 | 4006663 ~ 4009532 (+) | True | G459103 |
| TU527265 | other | downstream | 529808 | 4485397 ~ 4488552 (+) | True | G459303 |
| TU527165 | other | downstream | 559945 | 4515534 ~ 4518187 (+) | True | CI01000321_04515562_04517953 |
| TU527167 | other | downstream | 791823 | 4747412 ~ 4747464 (+) | True | G459223 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00028816 | False | 10596 | mRNA | 0.46 | 14 | NC_007130.7 | 9909962 ~ 10043142 (-) |
| grasscarp (Ctenopharyngodon idella) | TU204230 | True | 1234 | lncRNA | 0.41 | 1 | CI01000039 | 3262870 ~ 3264103 (+) |
| bowfin (Amia calva) | TU204230 | True | 357 | TUCP | 0.59 | 2 | PESF01000034.1 | 46571 ~ 47027 (+) |
