Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000339_00336428_00365467.mRNA |
| length | 3930 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 17 |
| gene id | CI01000339_00336428_00365467 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 335883 ~ 366764 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| id | description |
|---|---|
| K05744 | LIMK2; LIM domain kinase 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU551624 | lncRNA | upstream | 1172 | 334317 ~ 334711 (+) | True | G480700 |
| TU551623 | lncRNA | upstream | 5159 | 330308 ~ 330724 (+) | True | G480699 |
| TU551586 | lncRNA | upstream | 158982 | 176547 ~ 176901 (+) | True | G480662 |
| TU551582 | lncRNA | upstream | 173851 | 161805 ~ 162032 (+) | True | G480658 |
| TU551579 | lncRNA | upstream | 174922 | 159992 ~ 160961 (+) | True | G480657 |
| TU551636 | lncRNA | downstream | 8645 | 375409 ~ 383570 (+) | True | G480708 |
| TU551641 | lncRNA | downstream | 18745 | 385509 ~ 386379 (+) | False | G480711 |
| TU551640 | lncRNA | downstream | 18896 | 385660 ~ 386481 (+) | True | G480711 |
| TU551651 | lncRNA | downstream | 36034 | 402798 ~ 403543 (+) | True | G480721 |
| TU551614 | lncRNA | downstream | 42425 | 409189 ~ 409969 (+) | True | G480690 |
| CI01000339_00225794_00226825.mRNA | mRNA | upstream | 108922 | 224628 ~ 226961 (+) | True | CI01000339_00225794_00226825 |
| CI01000339_00214390_00215412.mRNA | mRNA | upstream | 119999 | 214006 ~ 215884 (+) | True | CI01000339_00214390_00215412 |
| CI01000339_00210534_00211598.mRNA | mRNA | upstream | 124282 | 210059 ~ 211601 (+) | True | CI01000339_00210534_00211598 |
| CI01000339_00188554_00189543.mRNA | mRNA | upstream | 145705 | 188397 ~ 190178 (+) | True | CI01000339_00188554_00189543 |
| CI01000339_00117608_00135474.mRNA | mRNA | upstream | 200211 | 117608 ~ 135672 (+) | True | CI01000339_00117608_00135474 |
| CI01000339_00405927_00407508.mRNA | mRNA | downstream | 39118 | 405882 ~ 408230 (+) | True | CI01000339_00405927_00407508 |
| CI01000339_00531202_00532113.mRNA | mRNA | downstream | 163674 | 530438 ~ 532470 (+) | True | CI01000339_00531202_00532113 |
| CI01000339_00541568_00553834.mRNA | mRNA | downstream | 174804 | 541568 ~ 553932 (+) | True | CI01000339_00541568_00553834 |
| CI01000339_00563492_00576878.mRNA | mRNA | downstream | 196728 | 563492 ~ 578031 (+) | True | CI01000339_00563492_00576878 |
| CI01000339_00585149_00589325.mRNA | mRNA | downstream | 218195 | 584959 ~ 590077 (+) | True | CI01000339_00585149_00589325 |
| TU551587 | other | upstream | 157900 | 177668 ~ 177983 (+) | True | G480663 |
| TU551542 | other | upstream | 258291 | 43834 ~ 77592 (+) | False | G480630 |
| TU551540 | other | upstream | 258413 | 43834 ~ 77470 (+) | False | G480630 |
| TU551697 | other | downstream | 267650 | 634414 ~ 640377 (+) | True | G480761 |
| TU552290 | other | downstream | 922557 | 1289321 ~ 1290733 (+) | True | G481321 |
| TU552307 | other | downstream | 1207770 | 1574534 ~ 1574698 (+) | True | G481338 |
| TU552822 | other | downstream | 1829836 | 2196600 ~ 2198750 (+) | False | CI01000339_02196706_02198050 |
| TU552823 | other | downstream | 1829836 | 2196600 ~ 2198809 (+) | True | CI01000339_02196706_02198050 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00058716 | False | 3536 | mRNA | 0.44 | 16 | NC_007116.7 | 20823409 ~ 20863374 (+) |
