RNA id: TU569971


Basic Information

Item Value
RNA id TU569971
length 210
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G496932
representative True

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 17489637 ~ 17489846 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAGAAAGTCCCGTCCAAACACAAGTGCAAAAGTTAAAAAAATAAAAATCTGGTGCAAACTGGACTGTTCCTTGAGAATGAGCCCCCACCAAGTGCCTGTATTTCCTCTCTGGAAGCTTCTGCTCCACCCCAAACATACAGGAAGAATTCCTCGTCGTCTGTAATTTAAATTCATTCCCAGCATTTTCTGCAGGAATTCTTTGTTATTCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU569969 lncRNA downstream 17876 17471557 ~ 17471761 (-) True G496930
TU569960 lncRNA downstream 18986 17470194 ~ 17470651 (-) True G496925
TU569888 lncRNA downstream 230493 17258684 ~ 17259144 (-) True G496863
TU569879 lncRNA downstream 289819 17198333 ~ 17199818 (-) True G496854
TU569857 lncRNA downstream 449991 17033136 ~ 17039646 (-) True G496833
TU569991 lncRNA upstream 35036 17524882 ~ 17596164 (-) True G496950
TU570068 lncRNA upstream 288868 17778714 ~ 17820423 (-) True G497021
TU570073 lncRNA upstream 321040 17810886 ~ 17834517 (-) True G497025
TU570085 lncRNA upstream 380019 17869865 ~ 17870084 (-) True G497037
TU570102 lncRNA upstream 403057 17892903 ~ 17893315 (-) True G497053
CI01000340_17451836_17453987.mRNA mRNA downstream 33654 17451452 ~ 17455983 (-) True CI01000340_17451836_17453987
CI01000340_17354694_17378496.mRNA mRNA downstream 111141 17354254 ~ 17378496 (-) True CI01000340_17354694_17378496
CI01000340_17318768_17326504.mRNA mRNA downstream 163093 17318100 ~ 17326544 (-) True CI01000340_17318768_17326504
CI01000340_17245510_17257329.mRNA mRNA downstream 232006 17244360 ~ 17257631 (-) True CI01000340_17245510_17257329
CI01000340_17190713_17213327.mRNA mRNA downstream 276161 17190397 ~ 17213476 (-) True CI01000340_17190713_17213327
CI01000340_17668871_17688583.mRNA mRNA upstream 178609 17668455 ~ 17689161 (-) True CI01000340_17668871_17688583
CI01000340_17700896_17753828.mRNA mRNA upstream 210979 17700825 ~ 17753828 (-) True CI01000340_17700896_17753828
CI01000340_17996222_18008569.mRNA mRNA upstream 505588 17995434 ~ 18010838 (-) True CI01000340_17996222_18008569
CI01000340_18013773_18027276.mRNA mRNA upstream 523685 18013531 ~ 18027276 (-) True CI01000340_18013773_18027276
CI01000340_18030360_18041157.mRNA mRNA upstream 540399 18030245 ~ 18041157 (-) True CI01000340_18030360_18041157
TU569877 other downstream 246898 17177492 ~ 17242739 (-) True G496853
TU569869 other downstream 443949 17043723 ~ 17045688 (-) True G496845
TU569607 other downstream 969663 16519911 ~ 16519974 (-) True G496628
TU568418 other downstream 1309552 16179988 ~ 16180085 (-) True G495611
TU568273 other downstream 1877074 15606741 ~ 15612563 (-) True G495475
TU570236 other upstream 929472 18442995 ~ 18454680 (-) True G497176
TU570552 other upstream 1669023 19158869 ~ 19164472 (-) False G497442

Expression Profile