Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00020588 |
| length | 876 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 5 |
| gene id | XLOC_010489 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 11960417 ~ 11963804 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ZDB-GENE-100922-127 | Predicted to enable MHC class II protein binding activity and protein tyrosine kinase binding activity. Predicted to be involved in T cell activation; interleukin-15-mediated signaling pathway; and positive regulation of ERK1 and ERK2 cascade. Predicted to be active in external side of plasma membrane and membrane raft. Is expressed in blood; gill; liver; muscle; and pleuroperitoneal region. |
| ensembl_id | ENSDART00000135379 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00022127 | lncRNA | downstream | 192 | 11960630 ~ 11961493 (-) | False | XLOC_010489 |
| TCONS_00020576 | lncRNA | downstream | 182241 | 11775141 ~ 11779444 (-) | False | XLOC_010484 |
| TCONS_00022126 | lncRNA | downstream | 322213 | 11597384 ~ 11639472 (-) | True | XLOC_010483 |
| TCONS_00022125 | lncRNA | downstream | 422864 | 11530885 ~ 11538821 (-) | True | XLOC_010482 |
| TCONS_00020570 | lncRNA | downstream | 423317 | 11437869 ~ 11538368 (-) | False | XLOC_010482 |
| TCONS_00022129 | lncRNA | upstream | 29607 | 11992566 ~ 12005084 (-) | True | XLOC_010491 |
| TCONS_00020593 | lncRNA | upstream | 89347 | 12052306 ~ 12054234 (-) | False | XLOC_010493 |
| TCONS_00020617 | lncRNA | upstream | 515738 | 12478697 ~ 12481849 (-) | False | XLOC_010505 |
| TCONS_00020619 | lncRNA | upstream | 541970 | 12504929 ~ 12512576 (-) | False | XLOC_010506 |
| TCONS_00020621 | lncRNA | upstream | 548227 | 12511186 ~ 12512593 (-) | True | XLOC_010506 |
| TCONS_00020586 | mRNA | downstream | 360 | 11960417 ~ 11961325 (-) | False | XLOC_010489 |
| TCONS_00020583 | mRNA | downstream | 15546 | 11911897 ~ 11946139 (-) | False | XLOC_010488 |
| TCONS_00020584 | mRNA | downstream | 28762 | 11911903 ~ 11932923 (-) | False | XLOC_010488 |
| TCONS_00020585 | mRNA | downstream | 32911 | 11911906 ~ 11928774 (-) | True | XLOC_010488 |
| TCONS_00020582 | mRNA | downstream | 102376 | 11853457 ~ 11859309 (-) | True | XLOC_010487 |
| TCONS_00020590 | mRNA | upstream | 2412 | 11965371 ~ 11986321 (-) | False | XLOC_010490 |
| TCONS_00020589 | mRNA | upstream | 2412 | 11965371 ~ 11986321 (-) | True | XLOC_010490 |
| TCONS_00020592 | mRNA | upstream | 89051 | 12052010 ~ 12060488 (-) | False | XLOC_010493 |
| TCONS_00020594 | mRNA | upstream | 89347 | 12052306 ~ 12060770 (-) | False | XLOC_010493 |
| TCONS_00020595 | mRNA | upstream | 89351 | 12052310 ~ 12060782 (-) | True | XLOC_010493 |
| TCONS_00020572 | other | downstream | 182213 | 11760919 ~ 11779472 (-) | False | XLOC_010484 |
| TCONS_00020567 | other | downstream | 1045281 | 10916290 ~ 10916404 (-) | True | XLOC_010478 |
| TCONS_00020565 | other | downstream | 1124453 | 10829809 ~ 10837232 (-) | False | XLOC_010476 |
| TCONS_00020559 | other | downstream | 1700060 | 10255207 ~ 10261625 (-) | True | XLOC_010469 |
| TCONS_00020535 | other | downstream | 2659491 | 9302079 ~ 9302194 (-) | True | XLOC_010455 |
| TCONS_00020591 | other | upstream | 49115 | 12012074 ~ 12012188 (-) | True | XLOC_010492 |
| TCONS_00020603 | other | upstream | 276448 | 12239407 ~ 12239460 (-) | True | XLOC_010497 |
| TCONS_00020604 | other | upstream | 284903 | 12247862 ~ 12247920 (-) | True | XLOC_010498 |
| TCONS_00020605 | other | upstream | 287309 | 12250268 ~ 12250323 (-) | True | XLOC_010499 |
| TCONS_00020606 | other | upstream | 290456 | 12253415 ~ 12253471 (-) | True | XLOC_010500 |
