RNA id: TU800565


Basic Information

Item Value
RNA id TU800565
length 495
RNA type TUCP
GC content 0.50
exon number 2
gene id G679801
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 1169859 ~ 1170528 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGCGTCTCTCTGTGAGTGAACAGGAAGTGCGTCGAAACCTTTCGCCAGAACTTCAGCAGAACTGCAGCTGTTACATTAAATGCAGTACGGAGGGATTATTTTGTTTGTCAAATTCCCCTGTGCACGAGTCCCTAACTTAACAAACTACACCAGAAAACAACCCTGTGCTCTGAGAATCTATCTATCTATCTATCTATCTATCGTTCCATCATCCACCCATCCATATTCTATCTATCTATCCATCATCCATCCGACCGTCCATCCATCCATCTGTCCGTCCACCCATCCATCCTTCCGTCTGTCCATCCATCCTTCCGTCCATCCATCCATCCATCTACCCATCCATCCTTCCTTCCGTCCGTCCGTCCATCCACCCACCCATCCATCCTTCCGTCCGTCCGTCTGTCCATCTATCCACCCATCCACCCATCCATCCGACCGTCCATCCACCCATCCGTCCACTTTTGAAATGACTGGGAAAAGGTGTCCCAATCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU800551 lncRNA downstream 24457 1091004 ~ 1145402 (-) True G679788
TU800466 lncRNA downstream 71692 1041771 ~ 1098167 (-) True G679707
TU800433 lncRNA downstream 292249 877380 ~ 877610 (-) True G679676
TU800427 lncRNA downstream 298836 870791 ~ 871023 (-) True G679670
TU800405 lncRNA downstream 334817 824393 ~ 835042 (-) True G679648
TU800586 lncRNA upstream 88862 1259390 ~ 1287095 (-) True G679822
TU800450 lncRNA upstream 259166 1429694 ~ 1430965 (-) True G679691
TU800460 lncRNA upstream 260957 1431485 ~ 1431740 (-) True G679701
TU800446 lncRNA upstream 261439 1431967 ~ 1432920 (-) True G679687
TU800459 lncRNA upstream 311260 1481788 ~ 1484144 (-) True G679700
CI01180000_01122408_01163931.mRNA mRNA downstream 5928 1122201 ~ 1163931 (-) True CI01180000_01122408_01163931
CI01180000_01112603_01114271.mRNA mRNA downstream 55456 1112048 ~ 1114403 (-) True CI01180000_01112603_01114271
CI01180000_00891459_00895567.mRNA mRNA downstream 274279 891196 ~ 895580 (-) True CI01180000_00891459_00895567
CI01180000_00882422_00889083.mRNA mRNA downstream 280481 882414 ~ 889378 (-) True CI01180000_00882422_00889083
CI01180000_00676567_00695049.mRNA mRNA downstream 474810 675388 ~ 695049 (-) True CI01180000_00676567_00695049
CI01180000_01180852_01194369.mRNA mRNA upstream 10068 1180596 ~ 1194369 (-) True CI01180000_01180852_01194369
CI01180000_01250357_01273327.mRNA mRNA upstream 79763 1250291 ~ 1273785 (-) True CI01180000_01250357_01273327
CI01180000_01366302_01368307.mRNA mRNA upstream 195735 1366263 ~ 1368806 (-) True CI01180000_01366302_01368307
CI01180000_01369334_01369786.mRNA mRNA upstream 198476 1369004 ~ 1370032 (-) True CI01180000_01369334_01369786
CI01180000_01424083_01427043.mRNA mRNA upstream 252999 1423527 ~ 1427387 (-) True CI01180000_01424083_01427043
TU800690 other upstream 608064 1778592 ~ 1781285 (-) False CI01180000_01776944_01781186
TU800691 other upstream 608064 1781450 ~ 1781488 (-) True G679907
TU801392 other upstream 1445826 2616354 ~ 2616756 (-) True G680525
TU801369 other upstream 1600519 2771047 ~ 2851916 (-) True G680506
TU801372 other upstream 1816553 2987081 ~ 2993864 (-) False CI01180000_02988807_02995955

Expression Profile