RNA id: TCONS_00023401


Basic Information

Item Value
RNA id TCONS_00023401
length 115
RNA type rRNA
GC content 0.45
exon number 1
gene id XLOC_011832
representative True

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 2165656 ~ 2165770 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

aaatacatcGATCATTTACTTATATCAAGACCGGATagtcactgaagctaagcagggctgagcctggttagtacctggatgggagaccactagggaacactaggggctctatttt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000182092

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00023395 lncRNA downstream 240765 1915788 ~ 1924891 (-) True XLOC_011829
TCONS_00024516 lncRNA downstream 285111 1875660 ~ 1880545 (-) False XLOC_011828
TCONS_00024518 lncRNA downstream 286276 1877638 ~ 1879380 (-) True XLOC_011828
TCONS_00024517 lncRNA downstream 287165 1877638 ~ 1878491 (-) False XLOC_011828
TCONS_00024515 lncRNA downstream 291433 1857693 ~ 1874223 (-) True XLOC_011827
TCONS_00023403 lncRNA upstream 235488 2401258 ~ 2422029 (-) True XLOC_011834
TCONS_00024809 lncRNA upstream 265129 2430899 ~ 2436278 (-) True XLOC_011835
TCONS_00024519 lncRNA upstream 855176 3020946 ~ 3051096 (-) True XLOC_011844
TCONS_00024520 lncRNA upstream 1657339 3823109 ~ 3829826 (-) True XLOC_011848
TCONS_00024521 lncRNA upstream 1738910 3904680 ~ 3912731 (-) False XLOC_011849
TCONS_00023400 mRNA downstream 39139 2108984 ~ 2126517 (-) True XLOC_011831
TCONS_00023399 mRNA downstream 126145 1999529 ~ 2039511 (-) True XLOC_011830
TCONS_00023398 mRNA downstream 128806 1998041 ~ 2036850 (-) False XLOC_011830
TCONS_00023397 mRNA downstream 128806 1998041 ~ 2036850 (-) False XLOC_011830
TCONS_00023396 mRNA downstream 128806 1998041 ~ 2036850 (-) False XLOC_011830
TCONS_00023402 mRNA upstream 182770 2348540 ~ 2386569 (-) True XLOC_011833
TCONS_00023404 mRNA upstream 313533 2479303 ~ 2535682 (-) True XLOC_011836
TCONS_00023405 mRNA upstream 403751 2569521 ~ 2595736 (-) False XLOC_011837
TCONS_00023406 mRNA upstream 403752 2569522 ~ 2573021 (-) False XLOC_011837
TCONS_00023407 mRNA upstream 408651 2574421 ~ 2578026 (-) False XLOC_011837
TCONS_00023378 other downstream 1960346 205194 ~ 205310 (-) True XLOC_011808
TCONS_00023424 other upstream 1125570 3291340 ~ 3291456 (-) True XLOC_011846
TCONS_00023441 other upstream 3077570 5243340 ~ 5296561 (-) True XLOC_011855
TCONS_00023445 other upstream 3505148 5670918 ~ 5731699 (-) True XLOC_011860
TCONS_00023449 other upstream 3797205 5962975 ~ 5963065 (-) True XLOC_011866
TCONS_00023450 other upstream 3801479 5967249 ~ 5967346 (-) True XLOC_011867