Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU21553 |
| length | 763 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC118944665 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 19553236 ~ 19561396 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU21550 | lncRNA | upstream | 4545 | 19551844 ~ 19552057 (+) | True | G18473 |
| TU21531 | lncRNA | upstream | 50755 | 19505523 ~ 19505847 (+) | True | G18454 |
| TU21428 | lncRNA | upstream | 217349 | 19337019 ~ 19339253 (+) | True | G18364 |
| TU21425 | lncRNA | upstream | 220686 | 19335510 ~ 19335916 (+) | True | G18361 |
| TU21403 | lncRNA | upstream | 247618 | 19308777 ~ 19308984 (+) | True | G18341 |
| TU21561 | lncRNA | downstream | 1510 | 19562906 ~ 19563403 (+) | True | G18480 |
| TU21563 | lncRNA | downstream | 4544 | 19565940 ~ 19617578 (+) | True | G18482 |
| TU21566 | lncRNA | downstream | 5418 | 19566814 ~ 19618798 (+) | True | G18484 |
| TU21587 | lncRNA | downstream | 68993 | 19630389 ~ 19633111 (+) | True | G18501 |
| TU21603 | lncRNA | downstream | 99935 | 19661331 ~ 19661968 (+) | True | G18515 |
| XR_005039991.1 | mRNA | upstream | 1179 | 19553236 ~ 19555423 (+) | False | LOC118944665 |
| XM_021580282.2 | mRNA | upstream | 6950 | 19538738 ~ 19549652 (+) | True | LOC110502309 |
| XM_021579973.2 | mRNA | upstream | 20046 | 19510958 ~ 19536556 (+) | False | tpm4a |
| XM_021580074.2 | mRNA | upstream | 20046 | 19520843 ~ 19536556 (+) | True | tpm4a |
| XM_021580022.2 | mRNA | upstream | 21242 | 19510957 ~ 19535360 (+) | False | tpm4a |
| XM_021580605.2 | mRNA | downstream | 7288 | 19568684 ~ 19573437 (+) | False | LOC110502506 |
| XM_021580824.2 | mRNA | downstream | 21783 | 19583179 ~ 19597535 (+) | True | LOC110502566 |
| XM_021580947.2 | mRNA | downstream | 58789 | 19620185 ~ 19628041 (+) | False | LOC110502681 |
| XM_036963710.1 | mRNA | downstream | 61284 | 19622680 ~ 19628041 (+) | True | LOC110502681 |
| XM_021581594.2 | mRNA | downstream | 75317 | 19636713 ~ 19641888 (+) | False | LOC110503198 |
| TU20408 | other | upstream | 600394 | 18882723 ~ 18956208 (+) | True | G17420 |
| TU19716 | other | upstream | 1565426 | 17975964 ~ 17991176 (+) | True | ccdc124 |
| TU19135 | other | upstream | 1891594 | 17654207 ~ 17665008 (+) | False | LOC110495874 |
| TU18429 | other | upstream | 2588812 | 16963057 ~ 16967790 (+) | True | LOC110492876 |
| TU18393 | other | upstream | 2636193 | 16916499 ~ 16920409 (+) | True | LOC110492606 |
| TU21562 | other | downstream | 3453 | 19564849 ~ 19565221 (+) | True | G18481 |
| TU21568 | other | downstream | 7389 | 19568785 ~ 19575028 (+) | True | LOC110502506 |
| TU22177 | other | downstream | 302395 | 19863791 ~ 19865605 (+) | True | LOC110503939 |
| TU22214 | other | downstream | 354190 | 19915586 ~ 19915832 (+) | True | G19083 |
| TU22535 | other | downstream | 681249 | 20242645 ~ 20242875 (+) | True | G19359 |
