Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62495 |
| length | 858 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 2 |
| gene id | shank2b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 51214830 ~ 51342260 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62530 | lncRNA | upstream | 43921 | 51289109 ~ 51289512 (+) | True | G56185 |
| TU62506 | lncRNA | upstream | 77789 | 51255351 ~ 51255644 (+) | True | G56162 |
| TU62500 | lncRNA | upstream | 87182 | 51245958 ~ 51246251 (+) | True | G56156 |
| TU62496 | lncRNA | upstream | 93795 | 51239330 ~ 51239638 (+) | True | G56152 |
| TU62296 | lncRNA | upstream | 139413 | 51175634 ~ 51194020 (+) | True | G55963 |
| TU62766 | lncRNA | downstream | 100704 | 51442964 ~ 51443171 (+) | True | G56415 |
| TU62808 | lncRNA | downstream | 131436 | 51473696 ~ 51473921 (+) | True | G56455 |
| TU62828 | lncRNA | downstream | 157945 | 51500205 ~ 51500443 (+) | True | G56475 |
| TU62841 | lncRNA | downstream | 176475 | 51518735 ~ 51555869 (+) | True | G56487 |
| TU62861 | lncRNA | downstream | 207109 | 51549369 ~ 51565773 (+) | True | G56507 |
| XM_021604338.2 | mRNA | upstream | 163089 | 51164077 ~ 51170344 (+) | True | acte1 |
| XR_005051364.1 | mRNA | upstream | 178037 | 51154507 ~ 51155396 (+) | True | LOC118964319 |
| XM_021604316.2 | mRNA | upstream | 257988 | 51071696 ~ 51075445 (+) | True | LOC110524544 |
| XR_005051360.1 | mRNA | upstream | 340314 | 50991983 ~ 50993119 (+) | True | LOC118964313 |
| XM_021604300.2 | mRNA | upstream | 462086 | 50856582 ~ 50871347 (+) | True | c1h11orf49 |
| XM_036979578.1 | mRNA | downstream | 16028 | 51358288 ~ 51424303 (+) | False | LOC110524569 |
| XM_036979586.1 | mRNA | downstream | 26337 | 51368597 ~ 51424303 (+) | False | LOC110524569 |
| XM_036979593.1 | mRNA | downstream | 26337 | 51368597 ~ 51424303 (+) | False | LOC110524569 |
| XM_036979603.1 | mRNA | downstream | 26337 | 51368597 ~ 51424303 (+) | False | LOC110524569 |
| XM_036979606.1 | mRNA | downstream | 29679 | 51371939 ~ 51424303 (+) | False | LOC110524569 |
| TU60888 | other | upstream | 1249437 | 50037574 ~ 50083996 (+) | True | LOC118964841 |
| TU59387 | other | upstream | 2439521 | 48893497 ~ 48893912 (+) | True | G53181 |
| TU58443 | other | upstream | 2950176 | 48380542 ~ 48383257 (+) | True | G52324 |
| TU58177 | other | upstream | 3308475 | 48006674 ~ 48024958 (+) | True | G52080 |
| TU56739 | other | upstream | 4074535 | 47227246 ~ 47258898 (+) | True | LOC110520864 |
| TU62774 | other | downstream | 107562 | 51449822 ~ 51450935 (+) | True | LOC110524575 |
| TU65446 | other | downstream | 2323955 | 53666215 ~ 53671273 (+) | True | LOC118936380 |
| TU65626 | other | downstream | 2645880 | 53988140 ~ 53988597 (+) | True | G59031 |
| TU65668 | other | downstream | 2702589 | 54044849 ~ 54062254 (+) | False | LOC110525327 |
| TU66625 | other | downstream | 3378928 | 54721188 ~ 54721463 (+) | True | G59963 |
