Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62766 |
| length | 208 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G56415 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 51442964 ~ 51443171 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62495 | lncRNA | upstream | 100704 | 51333433 ~ 51342260 (+) | False | shank2b |
| TU62494 | lncRNA | upstream | 102037 | 51339067 ~ 51340927 (+) | True | shank2b |
| TU62530 | lncRNA | upstream | 153452 | 51289109 ~ 51289512 (+) | True | G56185 |
| TU62506 | lncRNA | upstream | 187320 | 51255351 ~ 51255644 (+) | True | G56162 |
| TU62500 | lncRNA | upstream | 196713 | 51245958 ~ 51246251 (+) | True | G56156 |
| TU62808 | lncRNA | downstream | 30525 | 51473696 ~ 51473921 (+) | True | G56455 |
| TU62828 | lncRNA | downstream | 57034 | 51500205 ~ 51500443 (+) | True | G56475 |
| TU62841 | lncRNA | downstream | 75564 | 51518735 ~ 51555869 (+) | True | G56487 |
| TU62861 | lncRNA | downstream | 106198 | 51549369 ~ 51565773 (+) | True | G56507 |
| TU62910 | lncRNA | downstream | 164443 | 51607614 ~ 51607991 (+) | True | G56554 |
| XM_036979578.1 | mRNA | upstream | 18661 | 51358288 ~ 51424303 (+) | False | LOC110524569 |
| XM_036979586.1 | mRNA | upstream | 18661 | 51368597 ~ 51424303 (+) | False | LOC110524569 |
| XM_036979593.1 | mRNA | upstream | 18661 | 51368597 ~ 51424303 (+) | False | LOC110524569 |
| XM_036979603.1 | mRNA | upstream | 18661 | 51368597 ~ 51424303 (+) | False | LOC110524569 |
| XM_036979606.1 | mRNA | upstream | 18661 | 51371939 ~ 51424303 (+) | False | LOC110524569 |
| XM_021604377.2 | mRNA | downstream | 6182 | 51449353 ~ 51451460 (+) | False | LOC110524575 |
| XM_021604390.2 | mRNA | downstream | 11960 | 51455131 ~ 51458797 (+) | True | LOC110524584 |
| trnap-ugg-2 | mRNA | downstream | 186997 | 51630168 ~ 51630239 (+) | True | trnap-ugg-2 |
| trnap-agg | mRNA | downstream | 187661 | 51630832 ~ 51630903 (+) | True | trnap-agg |
| XM_021604437.2 | mRNA | downstream | 358826 | 51801997 ~ 51851775 (+) | False | LOC110524604 |
| TU60888 | other | upstream | 1358968 | 50037574 ~ 50083996 (+) | True | LOC118964841 |
| TU59387 | other | upstream | 2549052 | 48893497 ~ 48893912 (+) | True | G53181 |
| TU58443 | other | upstream | 3059707 | 48380542 ~ 48383257 (+) | True | G52324 |
| TU58177 | other | upstream | 3418006 | 48006674 ~ 48024958 (+) | True | G52080 |
| TU56739 | other | upstream | 4184066 | 47227246 ~ 47258898 (+) | True | LOC110520864 |
| TU62774 | other | downstream | 6651 | 51449822 ~ 51450935 (+) | True | LOC110524575 |
| TU65446 | other | downstream | 2223044 | 53666215 ~ 53671273 (+) | True | LOC118936380 |
| TU65626 | other | downstream | 2544969 | 53988140 ~ 53988597 (+) | True | G59031 |
| TU65668 | other | downstream | 2601678 | 54044849 ~ 54062254 (+) | False | LOC110525327 |
| TU66625 | other | downstream | 3278017 | 54721188 ~ 54721463 (+) | True | G59963 |
