Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU18935 |
| length | 299 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G16144 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 17231380 ~ 17231678 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18889 | lncRNA | downstream | 95023 | 17132578 ~ 17136357 (-) | True | G16100 |
| TU18759 | lncRNA | downstream | 223052 | 17005929 ~ 17008328 (-) | True | G16004 |
| TU18461 | lncRNA | downstream | 259017 | 16972129 ~ 16972363 (-) | True | G15742 |
| TU18456 | lncRNA | downstream | 266492 | 16964522 ~ 16964888 (-) | True | G15737 |
| TU18436 | lncRNA | downstream | 298668 | 16932440 ~ 16932712 (-) | True | G15718 |
| TU18941 | lncRNA | upstream | 6866 | 17238544 ~ 17238828 (-) | True | G16150 |
| TU18949 | lncRNA | upstream | 22112 | 17253790 ~ 17254418 (-) | True | G16158 |
| TU18951 | lncRNA | upstream | 26128 | 17257806 ~ 17258199 (-) | True | G16160 |
| TU18953 | lncRNA | upstream | 30700 | 17262378 ~ 17262650 (-) | True | G16162 |
| TU18974 | lncRNA | upstream | 68659 | 17300337 ~ 17300598 (-) | True | G16183 |
| XM_021567512.2 | mRNA | downstream | 10423 | 17173402 ~ 17220957 (-) | True | LOC110493215 |
| XM_021567862.2 | mRNA | downstream | 58173 | 17140522 ~ 17173207 (-) | False | LOC110493506 |
| XM_021567934.2 | mRNA | downstream | 58173 | 17140522 ~ 17173207 (-) | True | LOC110493506 |
| XM_021568053.2 | mRNA | downstream | 90988 | 17137016 ~ 17140392 (-) | True | LOC110493631 |
| XM_021567287.2 | mRNA | downstream | 270303 | 16943579 ~ 16961077 (-) | True | rab3ab |
| XM_021568957.2 | mRNA | upstream | 82806 | 17314484 ~ 17326759 (-) | False | comp |
| XR_002469236.2 | mRNA | upstream | 82806 | 17314484 ~ 17326759 (-) | True | comp |
| XM_021569135.2 | mRNA | upstream | 98249 | 17329927 ~ 17343550 (-) | True | LOC110494221 |
| XR_005038000.1 | mRNA | upstream | 131221 | 17362899 ~ 17365492 (-) | True | LOC118942066 |
| LOC110531963 | mRNA | upstream | 159218 | 17390896 ~ 17392469 (-) | True | LOC110531963 |
| TU18890 | other | downstream | 95023 | 17131420 ~ 17136357 (-) | False | G16100 |
| TU18891 | other | downstream | 95023 | 17131721 ~ 17136357 (-) | False | G16100 |
| TU18888 | other | downstream | 95023 | 17131803 ~ 17136357 (-) | False | G16100 |
| TU18315 | other | downstream | 359452 | 16860649 ~ 16871928 (-) | True | LOC110492105 |
| TU18158 | other | downstream | 699904 | 16531047 ~ 16531476 (-) | True | G15470 |
| TU18952 | other | upstream | 23558 | 17255236 ~ 17257241 (-) | True | G16161 |
| TU19906 | other | upstream | 858202 | 18089880 ~ 18094938 (-) | False | LOC110497564 |
| TU19908 | other | upstream | 858202 | 18089880 ~ 18094938 (-) | False | LOC110497564 |
| TU19904 | other | upstream | 861477 | 18093155 ~ 18094938 (-) | True | LOC110497564 |
| TU20793 | other | upstream | 1158445 | 18390123 ~ 18391533 (-) | False | LOC110497762 |
