Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU47170 |
| length | 213 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G41963 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 39084942 ~ 39085154 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47075 | lncRNA | downstream | 56514 | 39028203 ~ 39028428 (-) | True | G41876 |
| TU47060 | lncRNA | downstream | 67392 | 39016782 ~ 39017550 (-) | True | G41861 |
| TU47018 | lncRNA | downstream | 102707 | 38982006 ~ 38982235 (-) | True | G41819 |
| TU47011 | lncRNA | downstream | 107067 | 38977652 ~ 38977875 (-) | True | G41813 |
| TU46996 | lncRNA | downstream | 114852 | 38969768 ~ 38970090 (-) | True | G41798 |
| TU47649 | lncRNA | upstream | 7083 | 39092237 ~ 39092455 (-) | True | G42408 |
| TU47650 | lncRNA | upstream | 7378 | 39092532 ~ 39092743 (-) | True | G42409 |
| TU47657 | lncRNA | upstream | 11984 | 39097138 ~ 39097342 (-) | True | G42416 |
| TU47659 | lncRNA | upstream | 14978 | 39100132 ~ 39100373 (-) | True | G42418 |
| TU47661 | lncRNA | upstream | 17908 | 39103062 ~ 39103545 (-) | True | G42420 |
| XM_021600757.2 | mRNA | downstream | 624 | 39081003 ~ 39084318 (-) | True | LOC110522389 |
| LOC110520456 | mRNA | downstream | 65851 | 39015075 ~ 39019091 (-) | True | LOC110520456 |
| XR_005051684.1 | mRNA | downstream | 1018337 | 38065959 ~ 38066605 (-) | False | LOC118964575 |
| XR_005051686.1 | mRNA | downstream | 1023279 | 38061089 ~ 38061663 (-) | True | LOC118964577 |
| XM_036989519.1 | mRNA | downstream | 1391091 | 37688750 ~ 37693851 (-) | True | LOC118966689 |
| LOC118966691 | mRNA | upstream | 15671 | 39100825 ~ 39115097 (-) | True | LOC118966691 |
| XM_036977133.1 | mRNA | upstream | 229898 | 39315052 ~ 39336321 (-) | False | man2a2 |
| XM_036977115.1 | mRNA | upstream | 229898 | 39315052 ~ 39336324 (-) | False | man2a2 |
| XM_036977122.1 | mRNA | upstream | 229898 | 39315052 ~ 39336325 (-) | True | man2a2 |
| NM_001160543.1 | mRNA | upstream | 271979 | 39357133 ~ 39359660 (-) | True | kip1 |
| TU47067 | other | downstream | 62917 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU45924 | other | downstream | 893206 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU45886 | other | downstream | 959217 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45214 | other | downstream | 1367909 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU43930 | other | downstream | 2574113 | 36508538 ~ 36510829 (-) | True | G38855 |
| TU52237 | other | upstream | 3953574 | 43038728 ~ 43129029 (-) | True | tspan9a |
| TU55610 | other | upstream | 6635651 | 45720805 ~ 45721124 (-) | True | G49774 |
| TU55801 | other | upstream | 6863804 | 45948958 ~ 45949951 (-) | True | G49962 |
| TU57229 | other | upstream | 7979620 | 47064774 ~ 47119033 (-) | False | G51214 |
| TU57327 | other | upstream | 8203785 | 47288939 ~ 47289681 (-) | True | G51285 |
