Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU47659 |
| length | 242 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G42418 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 39100132 ~ 39100373 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47657 | lncRNA | downstream | 2790 | 39097138 ~ 39097342 (-) | True | G42416 |
| TU47650 | lncRNA | downstream | 7389 | 39092532 ~ 39092743 (-) | True | G42409 |
| TU47649 | lncRNA | downstream | 7677 | 39092237 ~ 39092455 (-) | True | G42408 |
| TU47170 | lncRNA | downstream | 14978 | 39084942 ~ 39085154 (-) | True | G41963 |
| TU47075 | lncRNA | downstream | 71704 | 39028203 ~ 39028428 (-) | True | G41876 |
| TU47661 | lncRNA | upstream | 2689 | 39103062 ~ 39103545 (-) | True | G42420 |
| TU47670 | lncRNA | upstream | 12949 | 39113322 ~ 39113632 (-) | True | G42429 |
| TU47864 | lncRNA | upstream | 288998 | 39389371 ~ 39390941 (-) | True | G42605 |
| TU47933 | lncRNA | upstream | 374413 | 39474786 ~ 39475050 (-) | True | G42661 |
| TU47935 | lncRNA | upstream | 378637 | 39479010 ~ 39479259 (-) | True | G42663 |
| XM_021600757.2 | mRNA | downstream | 15814 | 39081003 ~ 39084318 (-) | True | LOC110522389 |
| LOC110520456 | mRNA | downstream | 81041 | 39015075 ~ 39019091 (-) | True | LOC110520456 |
| XR_005051684.1 | mRNA | downstream | 1033527 | 38065959 ~ 38066605 (-) | False | LOC118964575 |
| XR_005051686.1 | mRNA | downstream | 1038469 | 38061089 ~ 38061663 (-) | True | LOC118964577 |
| XM_036989519.1 | mRNA | downstream | 1406281 | 37688750 ~ 37693851 (-) | True | LOC118966689 |
| LOC118966691 | mRNA | upstream | 452 | 39100825 ~ 39115097 (-) | True | LOC118966691 |
| XM_036977133.1 | mRNA | upstream | 214679 | 39315052 ~ 39336321 (-) | False | man2a2 |
| XM_036977115.1 | mRNA | upstream | 214679 | 39315052 ~ 39336324 (-) | False | man2a2 |
| XM_036977122.1 | mRNA | upstream | 214679 | 39315052 ~ 39336325 (-) | True | man2a2 |
| NM_001160543.1 | mRNA | upstream | 256760 | 39357133 ~ 39359660 (-) | True | kip1 |
| TU47067 | other | downstream | 78107 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU45924 | other | downstream | 908396 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU45886 | other | downstream | 974407 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45214 | other | downstream | 1383099 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU43930 | other | downstream | 2589303 | 36508538 ~ 36510829 (-) | True | G38855 |
| TU52237 | other | upstream | 3938355 | 43038728 ~ 43129029 (-) | True | tspan9a |
| TU55610 | other | upstream | 6620432 | 45720805 ~ 45721124 (-) | True | G49774 |
| TU55801 | other | upstream | 6848585 | 45948958 ~ 45949951 (-) | True | G49962 |
| TU57229 | other | upstream | 7964401 | 47064774 ~ 47119033 (-) | False | G51214 |
| TU57327 | other | upstream | 8188566 | 47288939 ~ 47289681 (-) | True | G51285 |
