RNA id: TU132070



Basic Information


Item Value
RNA id TU132070
length 306
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G115031
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13796216 ~ 13796521 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ttatagccctttactcaatgctgaggtgttttccctttactcaatgctgaggtttataaccctttttactcaatgctgaggtttataaccctttactcaatgctgaggtttataaccctttactcaatgctgaggtttataactctttactcaatgctgaggtttataactctttactcaatgctgaggtttataactctttactcaatgctgaggtttataactctttactcaatgctgaggtttataactctttactcaatgctgaggtttataaccctttactcaatgctgaggtttataacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU132069 lncRNA downstream 157 13795775 ~ 13796059 (-) True G115030
TU132060 lncRNA downstream 10637 13785353 ~ 13785579 (-) True G115021
TU132054 lncRNA downstream 21143 13774771 ~ 13775073 (-) True G115015
TU132036 lncRNA downstream 49903 13746080 ~ 13746313 (-) True G114998
TU132033 lncRNA downstream 51089 13742796 ~ 13745127 (-) True G114996
TU132080 lncRNA upstream 9144 13805665 ~ 13805878 (-) True G115041
TU132558 lncRNA upstream 122598 13919119 ~ 13919725 (-) True G115414
TU132598 lncRNA upstream 220313 14016834 ~ 14017064 (-) True G115443
TU132605 lncRNA upstream 235445 14031966 ~ 14033473 (-) True G115450
TU132624 lncRNA upstream 240840 14037361 ~ 14119171 (-) True G115460
XM_036938559.1 mRNA downstream 134585 13650806 ~ 13661631 (-) False LOC118937748
XM_036938552.1 mRNA downstream 134587 13650806 ~ 13661629 (-) False LOC118937748
XR_005035141.1 mRNA downstream 182109 13613625 ~ 13614107 (-) True LOC118937746
XM_036938506.1 mRNA downstream 295918 13496599 ~ 13500298 (-) False LOC110534058
XM_036938437.1 mRNA downstream 342552 13405882 ~ 13453664 (-) False LOC118937745
XM_036962010.1 mRNA upstream 31758 13828279 ~ 13914373 (-) False LOC110535394
XM_036962016.1 mRNA upstream 31758 13828279 ~ 13914376 (-) True LOC110535394
XM_036962206.1 mRNA upstream 129660 13926181 ~ 13935276 (-) True LOC110534076
XM_036962150.1 mRNA upstream 139317 13935838 ~ 13937466 (-) False LOC110535382
XM_036962145.1 mRNA upstream 139317 13935838 ~ 13937539 (-) True LOC110535382
TU131953 other downstream 134625 13653902 ~ 13661591 (-) True LOC118937748
TU131946 other downstream 213610 13574535 ~ 13582606 (-) True G114928
TU131917 other downstream 295933 13494448 ~ 13500283 (-) True LOC110534058
TU131789 other downstream 463710 13330748 ~ 13332506 (-) False G114812
TU132581 other upstream 165664 13962185 ~ 13976561 (-) True G115431
TU132617 other upstream 261021 14057542 ~ 14060958 (-) True LOC110535427
TU132669 other upstream 427338 14223859 ~ 14224919 (-) True G115492
TU132791 other upstream 613245 14409766 ~ 14412176 (-) True LOC110535605
TU132828 other upstream 729547 14526068 ~ 14526520 (-) True tmem245

Expression Profile