RNA id: TCONS_00002233


Basic Information

Item Value
RNA id TCONS_00002233
length 119
RNA type rRNA
GC content 0.59
exon number 1
gene id XLOC_001360
representative True

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 37363872 ~ 37363990 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gCAAGCAGCTAGCTCTCaccaactctcacatggtcgcccagcCCACTAAAGTGAAGCAGGACAGCGCCAGACAgtagctggatgggagaccacatgggaaagccagGTTGCTGCCGGAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000116159

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00003446 lncRNA downstream 891050 36450821 ~ 36472822 (-) True XLOC_001357
TCONS_00003444 lncRNA downstream 891060 36424768 ~ 36472812 (-) False XLOC_001357
TCONS_00003443 lncRNA downstream 891060 36424768 ~ 36472812 (-) False XLOC_001357
TCONS_00003445 lncRNA downstream 891060 36450821 ~ 36472812 (-) False XLOC_001357
TCONS_00002968 lncRNA downstream 1007406 36355781 ~ 36356466 (-) True XLOC_001356
TCONS_00002244 lncRNA upstream 806694 38170684 ~ 38171652 (-) True XLOC_001364
TCONS_00003447 lncRNA upstream 811872 38175862 ~ 38190204 (-) True XLOC_001365
TCONS_00003448 lncRNA upstream 1287170 38651160 ~ 38709154 (-) False XLOC_001370
TCONS_00002255 lncRNA upstream 1301177 38665167 ~ 38709221 (-) False XLOC_001370
TCONS_00002254 lncRNA upstream 1301177 38665167 ~ 38756904 (-) True XLOC_001370
TCONS_00002231 mRNA downstream 275906 36935154 ~ 37087966 (-) False XLOC_001359
TCONS_00002232 mRNA downstream 275906 37082639 ~ 37087966 (-) True XLOC_001359
TCONS_00002230 mRNA downstream 363365 36935154 ~ 37000507 (-) False XLOC_001359
TCONS_00002227 mRNA downstream 591725 36746078 ~ 36772147 (-) False XLOC_001358
TCONS_00002229 mRNA downstream 592160 36770863 ~ 36771712 (-) True XLOC_001358
TCONS_00002234 mRNA upstream 8929 37372919 ~ 37377509 (-) True XLOC_001361
TCONS_00002237 mRNA upstream 15073 37379063 ~ 37383741 (-) False XLOC_001362
TCONS_00002236 mRNA upstream 15073 37379063 ~ 37383741 (-) False XLOC_001362
TCONS_00002235 mRNA upstream 15073 37379063 ~ 37383741 (-) False XLOC_001362
TCONS_00002238 mRNA upstream 16672 37380662 ~ 37383539 (-) True XLOC_001362
TCONS_00002211 other downstream 2028456 35333000 ~ 35335416 (-) True XLOC_001346
TCONS_00002209 other downstream 2028702 35332924 ~ 35335170 (-) False XLOC_001346
TCONS_00002210 other downstream 2028779 35333000 ~ 35335093 (-) False XLOC_001346
TCONS_00002208 other downstream 2045663 35317354 ~ 35318209 (-) True XLOC_001345
TCONS_00002203 other downstream 2615550 34743459 ~ 34748322 (-) False XLOC_001339
TCONS_00002252 other upstream 1287170 38651160 ~ 38665973 (-) False XLOC_001370
TCONS_00002253 other upstream 1293637 38657627 ~ 38709154 (-) False XLOC_001370
TCONS_00002260 other upstream 1444699 38808689 ~ 38813418 (-) False XLOC_001371
TCONS_00002265 other upstream 2009812 39373802 ~ 39373911 (-) True XLOC_001373
TCONS_00002266 other upstream 2311716 39675706 ~ 39677920 (-) True XLOC_001374