Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU242385 |
| length | 410 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G213409 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 102168185 ~ 102168594 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU242384 | lncRNA | downstream | 136 | 102167620 ~ 102168049 (-) | True | G213408 |
| TU242379 | lncRNA | downstream | 1422 | 102165713 ~ 102166763 (-) | True | G213403 |
| TU242222 | lncRNA | downstream | 20543 | 102132896 ~ 102147642 (-) | False | G213266 |
| TU242223 | lncRNA | downstream | 20543 | 102144555 ~ 102147642 (-) | True | G213266 |
| TU242362 | lncRNA | downstream | 50052 | 102117568 ~ 102118133 (-) | True | G213389 |
| TU242386 | lncRNA | upstream | 27 | 102168621 ~ 102168920 (-) | True | G213410 |
| TU242387 | lncRNA | upstream | 1591 | 102170185 ~ 102170944 (-) | True | G213411 |
| TU242394 | lncRNA | upstream | 12438 | 102181032 ~ 102181249 (-) | True | G213418 |
| TU242401 | lncRNA | upstream | 17349 | 102185943 ~ 102186958 (-) | True | G213425 |
| TU242449 | lncRNA | upstream | 111627 | 102280221 ~ 102281689 (-) | True | G213465 |
| XM_021578971.2 | mRNA | downstream | 168098 | 101997799 ~ 102000087 (-) | True | LOC110501416 |
| XM_021578959.2 | mRNA | downstream | 251742 | 101912984 ~ 101916443 (-) | True | LOC110501407 |
| XM_021595701.2 | mRNA | downstream | 421638 | 101745268 ~ 101746547 (-) | False | LOC110517830 |
| XR_005039310.1 | mRNA | downstream | 461538 | 101706005 ~ 101706647 (-) | True | LOC118944015 |
| XR_005039307.1 | mRNA | downstream | 464225 | 101701386 ~ 101703960 (-) | True | LOC118944014 |
| XR_005039316.1 | mRNA | upstream | 119301 | 102287895 ~ 102292186 (-) | False | commd4 |
| XM_021579008.2 | mRNA | upstream | 119301 | 102287895 ~ 102292356 (-) | False | commd4 |
| XR_005039315.1 | mRNA | upstream | 119301 | 102287895 ~ 102292356 (-) | True | commd4 |
| XM_036961269.1 | mRNA | upstream | 257463 | 102426057 ~ 102444259 (-) | True | LOC110501505 |
| XM_036961273.1 | mRNA | upstream | 339898 | 102508492 ~ 102560979 (-) | False | hexa |
| TU241748 | other | downstream | 421634 | 101743015 ~ 101746551 (-) | False | LOC110517830 |
| TU241746 | other | downstream | 421634 | 101743062 ~ 101746551 (-) | False | LOC110517830 |
| TU241747 | other | downstream | 421634 | 101743062 ~ 101746551 (-) | False | LOC110517830 |
| TU241749 | other | downstream | 421634 | 101743062 ~ 101746551 (-) | True | LOC110517830 |
| TU241693 | other | downstream | 448453 | 101719367 ~ 101719732 (-) | True | G212836 |
| TU242469 | other | upstream | 217535 | 102386129 ~ 102387513 (-) | False | G213475 |
| TU242474 | other | upstream | 217535 | 102386129 ~ 102387513 (-) | False | G213475 |
| TU242475 | other | upstream | 360958 | 102529552 ~ 102531226 (-) | False | G213475 |
| TU243229 | other | upstream | 650774 | 102819368 ~ 102819829 (-) | True | G214030 |
| TU243238 | other | upstream | 675427 | 102844021 ~ 102847527 (-) | True | G214038 |
