Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002472957.2 |
| length | 1107 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 7 |
| gene id | LOC110520203 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 53883698 ~ 53893788 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | biological_process |
| GO:0019901 | protein kinase binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU310614 | lncRNA | downstream | 17666 | 53868709 ~ 53869460 (-) | True | G273584 |
| TU310545 | lncRNA | downstream | 120546 | 53766360 ~ 53766580 (-) | True | G273523 |
| TU310512 | lncRNA | downstream | 235175 | 53645933 ~ 53651951 (-) | True | G273493 |
| TU310466 | lncRNA | downstream | 284759 | 53602078 ~ 53602367 (-) | True | G273464 |
| TU310456 | lncRNA | downstream | 295446 | 53591439 ~ 53591680 (-) | True | G273454 |
| TU310730 | lncRNA | upstream | 124666 | 54018454 ~ 54025320 (-) | True | G273686 |
| TU310776 | lncRNA | upstream | 185991 | 54079779 ~ 54079990 (-) | True | G273731 |
| TU310780 | lncRNA | upstream | 190581 | 54084369 ~ 54084590 (-) | True | G273735 |
| TU310788 | lncRNA | upstream | 201084 | 54094872 ~ 54095187 (-) | True | G273743 |
| TU310797 | lncRNA | upstream | 218264 | 54112052 ~ 54112255 (-) | True | G273752 |
| XM_021597349.2 | mRNA | downstream | 22141 | 53817111 ~ 53864985 (-) | True | rab3gap1 |
| XM_036974578.1 | mRNA | downstream | 140257 | 53671765 ~ 53746869 (-) | True | LOC110520198 |
| NM_001160552.1 | mRNA | downstream | 223148 | 53661100 ~ 53663978 (-) | True | ubxd2 |
| XM_021597344.2 | mRNA | downstream | 324688 | 53537677 ~ 53562438 (-) | True | LOC110520195 |
| XM_021597342.2 | mRNA | downstream | 492808 | 53384541 ~ 53394318 (-) | True | LOC110520193 |
| XM_021597360.2 | mRNA | upstream | 287884 | 54181672 ~ 54191829 (-) | False | LOC110520207 |
| XR_002472958.2 | mRNA | upstream | 531770 | 54425558 ~ 54429214 (-) | True | LOC110520212 |
| XM_036974604.1 | mRNA | upstream | 610276 | 54504064 ~ 54594080 (-) | True | LOC110520213 |
| XM_021597379.2 | mRNA | upstream | 723740 | 54617528 ~ 54624544 (-) | True | LOC110520216 |
| XR_002472959.2 | mRNA | upstream | 739950 | 54633738 ~ 54636478 (-) | True | LOC110520218 |
| TU309646 | other | downstream | 636042 | 53249926 ~ 53251084 (-) | True | G272713 |
| TU309282 | other | downstream | 1178310 | 52708183 ~ 52708816 (-) | True | LOC110520182 |
| TU307459 | other | downstream | 2286896 | 51597935 ~ 51600230 (-) | True | il1rl1 |
| TU307458 | other | downstream | 2287228 | 51597399 ~ 51599898 (-) | False | il1rl1 |
| TU307414 | other | downstream | 2412987 | 51473324 ~ 51474139 (-) | True | fgf9 |
| TU311493 | other | upstream | 786130 | 54679918 ~ 54682805 (-) | True | G274344 |
| TU312299 | other | upstream | 1209706 | 55103494 ~ 55119212 (-) | True | LOC110520227 |
| TU312498 | other | upstream | 1516355 | 55410143 ~ 55411487 (-) | False | G275250 |
| TU312500 | other | upstream | 1516355 | 55410143 ~ 55411487 (-) | True | G275250 |
| TU315090 | other | upstream | 3376994 | 57270782 ~ 57297762 (-) | True | si:dkey-91i10.3 |
