Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001160552.1 |
| length | 880 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 4 |
| gene id | ubxd2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 53661100 ~ 53663978 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU310512 | lncRNA | downstream | 9149 | 53645933 ~ 53651951 (-) | True | G273493 |
| TU310466 | lncRNA | downstream | 58733 | 53602078 ~ 53602367 (-) | True | G273464 |
| TU310456 | lncRNA | downstream | 69420 | 53591439 ~ 53591680 (-) | True | G273454 |
| TU310297 | lncRNA | downstream | 263803 | 53397079 ~ 53397297 (-) | True | G273298 |
| TU309775 | lncRNA | downstream | 285579 | 53373540 ~ 53375521 (-) | True | G272832 |
| TU310545 | lncRNA | upstream | 102382 | 53766360 ~ 53766580 (-) | True | G273523 |
| TU310614 | lncRNA | upstream | 204731 | 53868709 ~ 53869460 (-) | True | G273584 |
| TU310730 | lncRNA | upstream | 354476 | 54018454 ~ 54025320 (-) | True | G273686 |
| TU310776 | lncRNA | upstream | 415801 | 54079779 ~ 54079990 (-) | True | G273731 |
| TU310780 | lncRNA | upstream | 420391 | 54084369 ~ 54084590 (-) | True | G273735 |
| XM_021597344.2 | mRNA | downstream | 98662 | 53537677 ~ 53562438 (-) | True | LOC110520195 |
| XM_021597342.2 | mRNA | downstream | 266782 | 53384541 ~ 53394318 (-) | True | LOC110520193 |
| XM_021597322.2 | mRNA | downstream | 785330 | 52827783 ~ 52875770 (-) | False | zeb2a |
| XM_036974563.1 | mRNA | downstream | 785330 | 52827783 ~ 52875770 (-) | True | zeb2a |
| XM_021597320.2 | mRNA | downstream | 785331 | 52827783 ~ 52875769 (-) | False | zeb2a |
| XM_036974578.1 | mRNA | upstream | 7787 | 53671765 ~ 53746869 (-) | True | LOC110520198 |
| XM_021597349.2 | mRNA | upstream | 153133 | 53817111 ~ 53864985 (-) | True | rab3gap1 |
| XM_021597355.2 | mRNA | upstream | 219720 | 53883698 ~ 53893786 (-) | False | LOC110520203 |
| XR_002472957.2 | mRNA | upstream | 223148 | 53887126 ~ 53893788 (-) | True | LOC110520203 |
| XM_021597360.2 | mRNA | upstream | 517694 | 54181672 ~ 54191829 (-) | False | LOC110520207 |
| TU309646 | other | downstream | 410016 | 53249926 ~ 53251084 (-) | True | G272713 |
| TU309282 | other | downstream | 952284 | 52708183 ~ 52708816 (-) | True | LOC110520182 |
| TU307459 | other | downstream | 2060870 | 51597935 ~ 51600230 (-) | True | il1rl1 |
| TU307458 | other | downstream | 2061202 | 51597399 ~ 51599898 (-) | False | il1rl1 |
| TU307414 | other | downstream | 2186961 | 51473324 ~ 51474139 (-) | True | fgf9 |
| TU311493 | other | upstream | 1015940 | 54679918 ~ 54682805 (-) | True | G274344 |
| TU312299 | other | upstream | 1439516 | 55103494 ~ 55119212 (-) | True | LOC110520227 |
| TU312498 | other | upstream | 1746165 | 55410143 ~ 55411487 (-) | False | G275250 |
| TU312500 | other | upstream | 1746165 | 55410143 ~ 55411487 (-) | True | G275250 |
| TU315090 | other | upstream | 3606804 | 57270782 ~ 57297762 (-) | True | si:dkey-91i10.3 |
