RNA id: TCONS_00029060


Basic Information

Item Value
RNA id TCONS_00029060
length 116
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_014709
representative True

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 19709927 ~ 19710042 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

accaacagccatatcaccctgtagCCAAAGACCAGTTACGCAATGAAGCCAGCAGGGCTGAGCTTGGTTAGTACCTGTATAGGAgacaacatgggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000174736

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00030204 lncRNA downstream 197590 19510557 ~ 19512337 (-) True XLOC_014706
TCONS_00030203 lncRNA downstream 248630 19459051 ~ 19461297 (-) True XLOC_014704
TCONS_00030202 lncRNA downstream 430061 19275813 ~ 19279866 (-) False XLOC_014701
TCONS_00029048 lncRNA downstream 686567 19016195 ~ 19023360 (-) True XLOC_014700
TCONS_00029044 lncRNA downstream 756721 18942726 ~ 18953206 (-) True XLOC_014699
TCONS_00029065 lncRNA upstream 9761 19719803 ~ 19721485 (-) False XLOC_014710
TCONS_00029068 lncRNA upstream 24634 19734676 ~ 19737491 (-) False XLOC_014710
TCONS_00030205 lncRNA upstream 24634 19734676 ~ 19745732 (-) False XLOC_014710
TCONS_00029069 lncRNA upstream 24634 19734676 ~ 19777499 (-) False XLOC_014710
TCONS_00029067 lncRNA upstream 24634 19734676 ~ 19871167 (-) False XLOC_014710
TCONS_00029059 mRNA downstream 45184 19596605 ~ 19664743 (-) True XLOC_014708
TCONS_00029056 mRNA downstream 110555 19549062 ~ 19599372 (-) False XLOC_014707
TCONS_00029057 mRNA downstream 110555 19551211 ~ 19599372 (-) False XLOC_014707
TCONS_00029058 mRNA downstream 153149 19551538 ~ 19556778 (-) True XLOC_014707
TCONS_00029055 mRNA downstream 204760 19496479 ~ 19505167 (-) True XLOC_014705
TCONS_00029061 mRNA upstream 7929 19717971 ~ 19720744 (-) False XLOC_014710
TCONS_00029062 mRNA upstream 7929 19717971 ~ 19871211 (-) False XLOC_014710
TCONS_00029063 mRNA upstream 7932 19717974 ~ 19721556 (-) False XLOC_014710
TCONS_00029064 mRNA upstream 9525 19719567 ~ 19744565 (-) False XLOC_014710
TCONS_00029071 mRNA upstream 351850 20061892 ~ 20106486 (-) False XLOC_014714
TCONS_00029050 other downstream 370640 19287163 ~ 19339287 (-) False XLOC_014701
TCONS_00029042 other downstream 848047 18861739 ~ 18861880 (-) True XLOC_014697
TCONS_00029041 other downstream 854451 18854057 ~ 18855476 (-) True XLOC_014696
TCONS_00029038 other downstream 868384 18841413 ~ 18841543 (-) True XLOC_014695
TCONS_00029037 other downstream 871386 18838411 ~ 18838541 (-) True XLOC_014694
TCONS_00029066 other upstream 18648 19728690 ~ 19728755 (-) True XLOC_014711
TCONS_00029070 other upstream 112120 19822162 ~ 19861512 (-) True XLOC_014710
TCONS_00029077 other upstream 433808 20143850 ~ 20148449 (-) False XLOC_014717
TCONS_00029085 other upstream 541630 20251672 ~ 20270141 (-) False XLOC_014721
TCONS_00029097 other upstream 729100 20439142 ~ 20439260 (-) True XLOC_014725