RNA id: TU254061



Basic Information


Item Value
RNA id TU254061
length 219
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G222455
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9073608 ~ 9073826 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atctaatatggtcatatatttcgcaggaggtcaggaagtgcagctcagtttcctcctcattttgtgggcagtgtgcacatagcctgtttttctttagagccaggtctgcctacagcggcctttctcaataacaagactatgctcactgagtctaaaCATAGGCAAAGCTTTTCTTACATTTGTgttagtcacagtggtcaggtattctgccatcttttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU254036 lncRNA downstream 990 9071936 ~ 9072618 (-) False G222435
TU254037 lncRNA downstream 990 9072161 ~ 9072618 (-) True G222435
TU254034 lncRNA downstream 1056 9071936 ~ 9072552 (-) False G222435
TU254035 lncRNA downstream 1056 9072161 ~ 9072552 (-) False G222435
TU254059 lncRNA downstream 4387 9068833 ~ 9069221 (-) True G222453
TU254072 lncRNA upstream 18532 9092358 ~ 9093122 (-) True G222464
TU254024 lncRNA upstream 24137 9097963 ~ 9098998 (-) True G222425
TU254077 lncRNA upstream 33684 9107510 ~ 9107836 (-) True G222467
TU254011 lncRNA upstream 45014 9118840 ~ 9121329 (-) False G222423
TU254012 lncRNA upstream 45014 9118840 ~ 9121329 (-) False G222423
XM_036968013.1 mRNA downstream 22746 8988084 ~ 9050862 (-) False LOC110520814
XM_021598297.2 mRNA downstream 91325 8973956 ~ 8982283 (-) True LOC110520856
XM_021598296.2 mRNA downstream 91347 8973956 ~ 8982261 (-) False LOC110520856
XM_036963171.1 mRNA downstream 124429 8938820 ~ 8949179 (-) False LOC100136250
XM_036968044.1 mRNA upstream 27599 9101425 ~ 9118436 (-) False LOC110501040
XM_036968051.1 mRNA upstream 27599 9101425 ~ 9118436 (-) False LOC110501040
XM_036968059.1 mRNA upstream 27599 9101425 ~ 9118436 (-) False LOC110501040
XM_036968026.1 mRNA upstream 27599 9101425 ~ 9118437 (-) False LOC110501040
XM_036968035.1 mRNA upstream 27599 9101425 ~ 9118437 (-) False LOC110501040
TU253487 other downstream 124421 8879071 ~ 8949187 (-) False G222023
TU254073 other upstream 19354 9093180 ~ 9095136 (-) False G222465
TU254075 other upstream 20050 9093876 ~ 9095216 (-) True G222465
TU254025 other upstream 37147 9110973 ~ 9118373 (-) True LOC110501040
TU254242 other upstream 420970 9494796 ~ 9496853 (-) False G222607
TU254262 other upstream 457348 9531174 ~ 9551240 (-) True LOC110508584

Expression Profile