RNA id: TU265334



Basic Information


Item Value
RNA id TU265334
length 201
lncRNA type intronic
GC content 0.46
exon number 1
gene id G232062
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 19121744 ~ 19121944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtttcatcttcaatgcccttgctgatggaaggaggttttcactcaaaatctcacgatacatggccccattcattctttcctttacacggatcagtcgtcctggtccctttgcagaaaaacatccccaaagcatgatgtttccacccccatgcttcacagtaggtatggtgttctttggatgcaactcagcattctttgtcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU265331 lncRNA downstream 5176 19116090 ~ 19116568 (-) True G232059
TU265142 lncRNA downstream 86493 19034953 ~ 19035251 (-) True G231893
TU265134 lncRNA downstream 91851 19029435 ~ 19029893 (-) False G231886
TU265135 lncRNA downstream 91851 19029435 ~ 19029893 (-) True G231886
TU265015 lncRNA downstream 255438 18865221 ~ 18866306 (-) True G231771
TU265335 lncRNA upstream 4748 19126692 ~ 19127031 (-) True G232063
TU265336 lncRNA upstream 7529 19129473 ~ 19129756 (-) True G232064
TU265337 lncRNA upstream 8702 19130646 ~ 19130983 (-) True G232065
TU265383 lncRNA upstream 103626 19225570 ~ 19233517 (-) True G232105
TU266200 lncRNA upstream 266088 19388032 ~ 19388986 (-) True G232835
XM_021592216.2 mRNA downstream 97592 18826879 ~ 19024152 (-) False LOC110511207
XM_021592227.2 mRNA downstream 97592 18826879 ~ 19024152 (-) True LOC110511207
XM_021592221.2 mRNA downstream 219271 18826879 ~ 18902473 (-) False LOC110511207
XM_021592238.2 mRNA downstream 286414 18826879 ~ 18835330 (-) False LOC110511207
XM_021592293.2 mRNA downstream 324375 18793985 ~ 18797369 (-) True LOC110511312
XM_036971122.1 mRNA upstream 294110 19416054 ~ 19424630 (-) False rims2a
XM_036971115.1 mRNA upstream 294110 19416054 ~ 19424631 (-) False rims2a
XM_036971108.1 mRNA upstream 294110 19416054 ~ 19582363 (-) False rims2a
XM_036971097.1 mRNA upstream 294110 19416054 ~ 19582365 (-) False rims2a
XM_036971132.1 mRNA upstream 294110 19416054 ~ 19582365 (-) False rims2a
TU264859 other downstream 519869 18599730 ~ 18601875 (-) True G231652
TU263980 other downstream 990690 18093756 ~ 18131054 (-) False LOC110503747
TU263981 other downstream 991658 18093756 ~ 18130086 (-) True LOC110503747
TU263791 other downstream 1143835 17975245 ~ 17977909 (-) False LOC110505118
TU262748 other downstream 2073400 17045025 ~ 17048344 (-) True G229707
TU265301 other upstream 37356 19159300 ~ 19282138 (-) True LOC110511176
TU266171 other upstream 420158 19542102 ~ 19599101 (-) False rims2a
TU266349 other upstream 526142 19648086 ~ 19648629 (-) True G232980
TU266428 other upstream 634260 19756204 ~ 19756618 (-) True G233052
TU266934 other upstream 1429839 20551783 ~ 20551997 (-) True G233513

Expression Profile