Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU305125 |
| length | 339 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G268548 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 49940876 ~ 49945765 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU305043 | lncRNA | downstream | 10214 | 49922997 ~ 49930662 (-) | True | G268470 |
| TU305030 | lncRNA | downstream | 59056 | 49879111 ~ 49881820 (-) | True | LOC110520120 |
| TU305075 | lncRNA | downstream | 134206 | 49806408 ~ 49806670 (-) | True | G268502 |
| TU305074 | lncRNA | downstream | 135697 | 49804977 ~ 49805179 (-) | True | G268501 |
| TU305034 | lncRNA | downstream | 146481 | 49793508 ~ 49794395 (-) | True | G268467 |
| TU305138 | lncRNA | upstream | 15150 | 49960915 ~ 49961213 (-) | True | G268560 |
| TU305266 | lncRNA | upstream | 100161 | 50045926 ~ 50046290 (-) | True | G268673 |
| TU305294 | lncRNA | upstream | 132019 | 50077784 ~ 50077987 (-) | True | G268700 |
| TU305295 | lncRNA | upstream | 132354 | 50078119 ~ 50078323 (-) | True | G268701 |
| TU305296 | lncRNA | upstream | 134718 | 50080483 ~ 50080686 (-) | True | G268702 |
| XM_036974450.1 | mRNA | downstream | 20548 | 49905433 ~ 49920328 (-) | True | LOC110520122 |
| XM_021597197.2 | mRNA | downstream | 20549 | 49905433 ~ 49920327 (-) | False | LOC110520122 |
| XM_021597196.2 | mRNA | downstream | 39301 | 49895327 ~ 49901575 (-) | False | LOC110520121 |
| XM_036974448.1 | mRNA | downstream | 39301 | 49895327 ~ 49901575 (-) | False | LOC110520121 |
| XM_021597195.2 | mRNA | downstream | 45766 | 49882325 ~ 49895110 (-) | False | LOC110520120 |
| XM_021597199.2 | mRNA | upstream | 16702 | 49962467 ~ 49978117 (-) | False | atf2 |
| XM_021597200.2 | mRNA | upstream | 16702 | 49962467 ~ 49978117 (-) | False | atf2 |
| XM_036974452.1 | mRNA | upstream | 16702 | 49962467 ~ 49978120 (-) | False | atf2 |
| XM_021597198.2 | mRNA | upstream | 16702 | 49962467 ~ 49978892 (-) | True | atf2 |
| XM_021597204.2 | mRNA | upstream | 33431 | 49979196 ~ 49981815 (-) | False | LOC110520125 |
| TU305117 | other | downstream | 39338 | 49900173 ~ 49901538 (-) | True | LOC110520121 |
| TU305027 | other | downstream | 69231 | 49867217 ~ 49871645 (-) | True | LOC110520119 |
| TU304905 | other | downstream | 373402 | 49563848 ~ 49567474 (-) | True | LOC110520112 |
| TU304903 | other | downstream | 374887 | 49563848 ~ 49565989 (-) | False | LOC110520112 |
| TU304858 | other | downstream | 437905 | 49502416 ~ 49502971 (-) | True | LOC118944672 |
| TU306341 | other | upstream | 494440 | 50440205 ~ 50442872 (-) | True | LOC110520139 |
| TU306786 | other | upstream | 1182675 | 51128440 ~ 51129310 (-) | True | LOC110520160 |
| TU307414 | other | upstream | 1527559 | 51473324 ~ 51474139 (-) | True | fgf9 |
| TU307458 | other | upstream | 1651634 | 51597399 ~ 51599898 (-) | False | il1rl1 |
| TU307459 | other | upstream | 1652170 | 51597935 ~ 51600230 (-) | True | il1rl1 |
