Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021603603.2 |
| length | 1324 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 10 |
| gene id | cope |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 59710615 ~ 59714101 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | biological_process |
| GO:0005198 | structural molecule activity | molecular_function |
| id | description |
|---|---|
| K17268 | COPE; coatomer subunit epsilon |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU478293 | lncRNA | downstream | 44727 | 59664718 ~ 59665888 (-) | True | G422089 |
| TU478292 | lncRNA | downstream | 46005 | 59663321 ~ 59664610 (-) | True | G422088 |
| TU478149 | lncRNA | downstream | 337010 | 59372985 ~ 59373605 (-) | False | G421951 |
| TU478150 | lncRNA | downstream | 337224 | 59372985 ~ 59373391 (-) | True | G421951 |
| TU478148 | lncRNA | downstream | 337861 | 59372319 ~ 59372754 (-) | True | G421950 |
| TU478336 | lncRNA | upstream | 4608 | 59718709 ~ 59731791 (-) | False | G422125 |
| TU478339 | lncRNA | upstream | 17958 | 59732059 ~ 59734459 (-) | False | G422125 |
| TU478332 | lncRNA | upstream | 18115 | 59732216 ~ 59734459 (-) | True | G422125 |
| TU478354 | lncRNA | upstream | 26181 | 59740282 ~ 59740548 (-) | True | G422138 |
| TU478355 | lncRNA | upstream | 27303 | 59741404 ~ 59741629 (-) | True | G422139 |
| XM_021603601.2 | mRNA | downstream | 923 | 59665915 ~ 59709692 (-) | True | LOC110524188 |
| XM_021603602.2 | mRNA | downstream | 928 | 59665915 ~ 59709687 (-) | False | LOC110524188 |
| XR_005051822.1 | mRNA | downstream | 98577 | 59608382 ~ 59612038 (-) | True | LOC118964629 |
| XM_021603586.2 | mRNA | downstream | 146939 | 59468780 ~ 59563676 (-) | True | LOC110524184 |
| XM_021603590.2 | mRNA | downstream | 146942 | 59468780 ~ 59563673 (-) | False | LOC110524184 |
| XM_021603608.2 | mRNA | upstream | 31375 | 59745476 ~ 59754819 (-) | True | LOC110524192 |
| XM_021603609.2 | mRNA | upstream | 58660 | 59772761 ~ 59776655 (-) | False | LOC110524193 |
| XM_021603610.2 | mRNA | upstream | 58660 | 59772761 ~ 59776656 (-) | True | LOC110524193 |
| XM_021603612.2 | mRNA | upstream | 73643 | 59787744 ~ 59797770 (-) | False | LOC110524194 |
| XM_021603614.2 | mRNA | upstream | 73643 | 59787744 ~ 59797771 (-) | False | LOC110524194 |
| TU477230 | other | downstream | 572358 | 59132870 ~ 59138257 (-) | True | lsg1 |
| TU477090 | other | downstream | 674316 | 59026103 ~ 59036299 (-) | True | G420982 |
| TU476443 | other | downstream | 1296472 | 58413128 ~ 58414143 (-) | True | G420421 |
| TU476193 | other | downstream | 1596555 | 58112387 ~ 58114060 (-) | True | G420193 |
| TU475656 | other | downstream | 2004679 | 57699745 ~ 57705936 (-) | True | G419714 |
| TU478587 | other | upstream | 386664 | 60100765 ~ 60101056 (-) | True | G422347 |
| TU479791 | other | upstream | 1344893 | 61058994 ~ 61071143 (-) | True | LOC110524239 |
| TU480894 | other | upstream | 1902769 | 61616870 ~ 61617244 (-) | True | G424474 |
| TU480919 | other | upstream | 1935866 | 61649967 ~ 61651775 (-) | True | G424499 |
| TU480929 | other | upstream | 1944932 | 61659033 ~ 61659585 (-) | True | G424502 |
