Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU539829 |
| length | 242 |
| lncRNA type | intronic |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G474830 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 12478455 ~ 12478696 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU539813 | lncRNA | downstream | 32307 | 12445753 ~ 12446148 (-) | True | G474814 |
| TU539806 | lncRNA | downstream | 46412 | 12431250 ~ 12432043 (-) | True | G474807 |
| TU539788 | lncRNA | downstream | 84025 | 12393453 ~ 12394430 (-) | False | G474793 |
| TU540311 | lncRNA | upstream | 121284 | 12599980 ~ 12600688 (-) | True | G475245 |
| TU540319 | lncRNA | upstream | 131772 | 12610468 ~ 12610740 (-) | True | G475252 |
| TU540429 | lncRNA | upstream | 331181 | 12809877 ~ 12810217 (-) | True | G475359 |
| TU540445 | lncRNA | upstream | 382970 | 12861666 ~ 12871277 (-) | False | G475375 |
| TU540446 | lncRNA | upstream | 386881 | 12865577 ~ 12871277 (-) | False | G475375 |
| XM_021605276.2 | mRNA | downstream | 206899 | 12258615 ~ 12271556 (-) | False | gkap1 |
| XM_021605289.2 | mRNA | upstream | 110364 | 12589060 ~ 12623505 (-) | False | rtkn |
| XM_021605287.2 | mRNA | upstream | 110364 | 12589060 ~ 12650568 (-) | False | rtkn |
| XM_021605288.2 | mRNA | upstream | 110364 | 12589060 ~ 12650573 (-) | False | rtkn |
| XM_021605283.2 | mRNA | upstream | 110364 | 12589060 ~ 12703820 (-) | False | rtkn |
| XM_021605282.2 | mRNA | upstream | 110364 | 12589060 ~ 12703823 (-) | False | rtkn |
| TU539726 | other | downstream | 53220 | 12424461 ~ 12425235 (-) | True | LOC110525279 |
| TU539592 | other | downstream | 448845 | 12029159 ~ 12029610 (-) | True | G474614 |
| TU539498 | other | downstream | 521918 | 11955266 ~ 11956537 (-) | True | LOC110525267 |
| TU538887 | other | downstream | 735697 | 11742202 ~ 11742758 (-) | True | G474030 |
| TU538785 | other | downstream | 876458 | 11601515 ~ 11601997 (-) | True | G473930 |
| TU540491 | other | upstream | 473556 | 12952252 ~ 12954051 (-) | True | G475413 |
| TU540518 | other | upstream | 550689 | 13029385 ~ 13046261 (-) | True | LOC110525296 |
| TU540658 | other | upstream | 718619 | 13197315 ~ 13198012 (-) | True | G475573 |
| TU541500 | other | upstream | 1552719 | 14031415 ~ 14087681 (-) | False | fam172a |
| TU542805 | other | upstream | 2475397 | 14954093 ~ 14956050 (-) | True | G477528 |
