Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU539806 |
| length | 515 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G474807 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 12431250 ~ 12432043 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU539788 | lncRNA | downstream | 36820 | 12393453 ~ 12394430 (-) | False | G474793 |
| TU539789 | lncRNA | downstream | 36820 | 12393540 ~ 12394430 (-) | False | G474793 |
| TU539790 | lncRNA | downstream | 36820 | 12393540 ~ 12394430 (-) | False | G474793 |
| TU539792 | lncRNA | downstream | 36820 | 12393540 ~ 12394430 (-) | True | G474793 |
| TU539722 | lncRNA | downstream | 123822 | 12307153 ~ 12307428 (-) | True | G474731 |
| TU539813 | lncRNA | upstream | 13710 | 12445753 ~ 12446148 (-) | True | G474814 |
| TU539829 | lncRNA | upstream | 46412 | 12478455 ~ 12478696 (-) | True | G474830 |
| TU540311 | lncRNA | upstream | 167937 | 12599980 ~ 12600688 (-) | True | G475245 |
| TU540319 | lncRNA | upstream | 178425 | 12610468 ~ 12610740 (-) | True | G475252 |
| TU540429 | lncRNA | upstream | 377834 | 12809877 ~ 12810217 (-) | True | G475359 |
| XM_021605276.2 | mRNA | downstream | 159694 | 12258615 ~ 12271556 (-) | False | gkap1 |
| XM_021605289.2 | mRNA | upstream | 157017 | 12589060 ~ 12623505 (-) | False | rtkn |
| XM_021605287.2 | mRNA | upstream | 157017 | 12589060 ~ 12650568 (-) | False | rtkn |
| XM_021605288.2 | mRNA | upstream | 157017 | 12589060 ~ 12650573 (-) | False | rtkn |
| XM_021605283.2 | mRNA | upstream | 157017 | 12589060 ~ 12703820 (-) | False | rtkn |
| XM_021605282.2 | mRNA | upstream | 157017 | 12589060 ~ 12703823 (-) | False | rtkn |
| TU539726 | other | downstream | 6015 | 12424461 ~ 12425235 (-) | True | LOC110525279 |
| TU539592 | other | downstream | 401640 | 12029159 ~ 12029610 (-) | True | G474614 |
| TU539498 | other | downstream | 474713 | 11955266 ~ 11956537 (-) | True | LOC110525267 |
| TU538887 | other | downstream | 688492 | 11742202 ~ 11742758 (-) | True | G474030 |
| TU538785 | other | downstream | 829253 | 11601515 ~ 11601997 (-) | True | G473930 |
| TU540491 | other | upstream | 520209 | 12952252 ~ 12954051 (-) | True | G475413 |
| TU540518 | other | upstream | 597342 | 13029385 ~ 13046261 (-) | True | LOC110525296 |
| TU540658 | other | upstream | 765272 | 13197315 ~ 13198012 (-) | True | G475573 |
| TU541500 | other | upstream | 1599372 | 14031415 ~ 14087681 (-) | False | fam172a |
| TU542805 | other | upstream | 2522050 | 14954093 ~ 14956050 (-) | True | G477528 |
