Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU577827 |
| length | 217 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G509058 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 42417825 ~ 42418041 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU577804 | lncRNA | downstream | 748 | 42410327 ~ 42417077 (-) | True | LOC118964871 |
| TU577803 | lncRNA | downstream | 15595 | 42398976 ~ 42402230 (-) | True | G509034 |
| TU577814 | lncRNA | downstream | 31119 | 42386073 ~ 42386706 (-) | True | G509045 |
| TU577645 | lncRNA | downstream | 273985 | 42142383 ~ 42143840 (-) | True | G508888 |
| TU577663 | lncRNA | downstream | 297434 | 42120186 ~ 42120391 (-) | True | G508902 |
| TU577828 | lncRNA | upstream | 70 | 42418111 ~ 42418353 (-) | True | G509059 |
| TU578070 | lncRNA | upstream | 1242 | 42419283 ~ 42420286 (-) | True | G509281 |
| TU578071 | lncRNA | upstream | 4949 | 42422990 ~ 42423760 (-) | True | LOC110525992 |
| TU578072 | lncRNA | upstream | 7501 | 42425542 ~ 42425753 (-) | True | G509283 |
| TU578073 | lncRNA | upstream | 8242 | 42426283 ~ 42426615 (-) | True | G509284 |
| XR_005052110.1 | mRNA | downstream | 4574 | 42404839 ~ 42413251 (-) | False | LOC118964871 |
| XM_021606544.2 | mRNA | downstream | 57433 | 42302921 ~ 42360392 (-) | True | LOC110525990 |
| XM_021606543.2 | mRNA | downstream | 116076 | 42252483 ~ 42301749 (-) | True | npdc1b |
| XM_036980138.1 | mRNA | downstream | 176387 | 42146659 ~ 42241438 (-) | False | LOC110525987 |
| XM_036981747.1 | mRNA | upstream | 5370 | 42423411 ~ 42520495 (-) | False | LOC110525992 |
| XM_021606552.2 | mRNA | upstream | 121823 | 42539864 ~ 42549214 (-) | True | noxa1 |
| XM_021606553.2 | mRNA | upstream | 158488 | 42576529 ~ 42587286 (-) | False | LOC110525994 |
| XM_021606554.2 | mRNA | upstream | 158488 | 42576529 ~ 42587286 (-) | False | LOC110525994 |
| XM_021606555.2 | mRNA | upstream | 158924 | 42576965 ~ 42587286 (-) | True | LOC110525994 |
| TU577801 | other | downstream | 14605 | 42372441 ~ 42403220 (-) | False | G509034 |
| TU577652 | other | downstream | 272940 | 42144097 ~ 42144885 (-) | True | G508891 |
| TU577033 | other | downstream | 596615 | 41820855 ~ 41821210 (-) | True | G508303 |
| TU576563 | other | downstream | 955903 | 41421024 ~ 41461922 (-) | True | G507906 |
| TU578229 | other | upstream | 225478 | 42643519 ~ 42645869 (-) | True | G509432 |
| TU578716 | other | upstream | 658651 | 43076692 ~ 43077157 (-) | True | G509902 |
| TU578766 | other | upstream | 704505 | 43122546 ~ 43123092 (-) | True | G509949 |
| TU578769 | other | upstream | 706540 | 43124581 ~ 43125387 (-) | True | G509952 |
| TU579133 | other | upstream | 1105673 | 43523714 ~ 43524108 (-) | True | G510310 |
