RNA id: TCONS_00034230



Basic Information


Item Value
RNA id TCONS_00034230
length 725
RNA type mRNA
GC content 0.39
exon number 5
gene id XLOC_017174
representative True

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 11800063 ~ 11803995 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GGGTCAGAGAGGATGCTGTGAGTAAAGGCGCGAAGACGTCAACATGTCTGAAGGACAGGGCGATAAAAGTGACAGATACTCTGGATGCACAGAATTTGCAGTGGATGAGGTGACAGCTTGTGCTAAAGAAGAGACAAAGGAGGCAAGAATCATAAAAAACTGCAGCCGACTAGCAAGGACTTGCAGGAACCGCACAGAACAAAGAGATCTTCACAAAACGAGAGAAGAAGGTGGTCTTTGGAGGAGATCAAGGCCGTGGAGAAGACAATGATGGAATTCATAATGTCTGGAAAGGTTCCTGGTAAAGCCCAGTGCATGAACTGTATCGAAAGTTCCCCAGCAGCACTTCAAAATAGAAGTTGGGAGGGGGtgaaattttatgtaaaaaatcgCATTGATTCCCTAAAGAAAAAATTGTGAAAGGTAAGGACCTtcatctaattatttttttcGTGTCTGCCGGAAGAAAGAAaatttattacttaaaaaaatgtgaaaggtAGGTGAAAGGGCCTTCACCACTGTTTTTTCTTCATGATTGTTGAAAGCAACAAGTTTGATTTCgttaaagcaaaaaaatgtaaaagggcCTTCACCAGTTTTGTCTTTGTTAAAGGCAACATGTATGTGAATCTTGTTTAAGCAAACTCAACATGCATCTGCTTAAAGAGCAGTATACTAAAACGTTcatgttaacatttaaataaatgtttaaaacactaaaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000152230

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00036552 lncRNA upstream 68009 11730319 ~ 11732054 (+) False XLOC_017173
TCONS_00036551 lncRNA upstream 155715 11643082 ~ 11644348 (+) False XLOC_017172
TCONS_00036550 lncRNA upstream 155715 11643082 ~ 11644348 (+) True XLOC_017172
TCONS_00036549 lncRNA upstream 728898 11069616 ~ 11071165 (+) True XLOC_017171
TCONS_00036548 lncRNA upstream 1309999 10489468 ~ 10490064 (+) False XLOC_017166
TCONS_00036373 lncRNA downstream 107557 11911552 ~ 11916287 (+) False XLOC_017175
TCONS_00036372 lncRNA downstream 107557 11911552 ~ 11916287 (+) False XLOC_017175
TCONS_00036374 lncRNA downstream 107905 11911900 ~ 11916287 (+) True XLOC_017175
TCONS_00036375 lncRNA downstream 176783 11980778 ~ 11985215 (+) True XLOC_017176
TCONS_00034231 lncRNA downstream 399767 12203762 ~ 12208117 (+) True XLOC_017177
TCONS_00034229 mRNA upstream 63835 11734029 ~ 11736228 (+) True XLOC_017173
TCONS_00034228 mRNA upstream 64724 11731046 ~ 11735339 (+) False XLOC_017173
TCONS_00034227 mRNA upstream 64786 11731039 ~ 11735277 (+) False XLOC_017173
TCONS_00034224 mRNA upstream 1069887 10723292 ~ 10730176 (+) False XLOC_017170
TCONS_00034226 mRNA upstream 1070715 10727022 ~ 10729348 (+) True XLOC_017170
TCONS_00034233 mRNA downstream 898928 12702923 ~ 12722351 (+) True XLOC_017180
TCONS_00034234 mRNA downstream 1026453 12830448 ~ 12834749 (+) False XLOC_017181
TCONS_00034238 mRNA downstream 1337413 13141408 ~ 13174165 (+) True XLOC_017185
TCONS_00034239 mRNA downstream 1371384 13175379 ~ 13311918 (+) False XLOC_017186
TCONS_00034242 mRNA downstream 1599286 13403281 ~ 13441967 (+) False XLOC_017187
TCONS_00034225 other upstream 1070784 10723727 ~ 10729279 (+) False XLOC_017170
TCONS_00034217 other upstream 1310173 10489621 ~ 10489890 (+) True XLOC_017166
TCONS_00034207 other upstream 2031314 9763367 ~ 9768749 (+) True XLOC_017159
TCONS_00034205 other upstream 2077925 9720121 ~ 9722138 (+) True XLOC_017158
TCONS_00034201 other upstream 2441933 9355970 ~ 9358130 (+) True XLOC_017155
TCONS_00034232 other downstream 794642 12598637 ~ 12605833 (+) True XLOC_017178
TCONS_00034240 other downstream 1371806 13175801 ~ 13309410 (+) False XLOC_017186
TCONS_00034241 other downstream 1430949 13234944 ~ 13236118 (+) True XLOC_017186
TCONS_00034272 other downstream 3164142 14968137 ~ 15001305 (+) False XLOC_017205
TCONS_00034274 other downstream 3194961 14998956 ~ 14999072 (+) True XLOC_017206

Expression Profile


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