RNA id: TU756763



Basic Information


Item Value
RNA id TU756763
length 325
lncRNA type intronic
GC content 0.44
exon number 1
gene id G664782
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 2071263 ~ 2071587 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


acacaaacaactggatttgttatccttTCAtttccctgcctccagtccacttaccgatatctgaacaagagagcctcatcgaagtTGCAACAAGCgcttctgtgaaaatgtaatttaatcagaagccactgcctgatttctggattgggctgcgctcagagtatcctgtcttggcaaatcgtgctgtttagacactgatgccctttgcaaccacgtacctatgtgagagtggattctcagccctcactagcatgaaaactaaatacaggcacggatgtgtgtggaaaattatttaagactgagactctctccaatacaacccaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU756762 lncRNA downstream 95 2070896 ~ 2071168 (-) True G664781
TU756759 lncRNA downstream 4963 2065804 ~ 2066300 (-) True G664778
TU756710 lncRNA downstream 5533 2008388 ~ 2065730 (-) False G664739
TU756709 lncRNA downstream 5533 2064899 ~ 2065730 (-) True G664739
TU756707 lncRNA downstream 64109 2006732 ~ 2007154 (-) True G664737
TU756769 lncRNA upstream 22293 2093880 ~ 2094188 (-) True G664788
TU756777 lncRNA upstream 41018 2112605 ~ 2113415 (-) True G664796
TU756780 lncRNA upstream 45821 2117408 ~ 2119430 (-) True G664798
TU756782 lncRNA upstream 48827 2120414 ~ 2121459 (-) True G664800
TU756791 lncRNA upstream 72867 2144454 ~ 2145063 (-) True G664809
XM_036984538.1 mRNA downstream 49637 1976310 ~ 2021626 (-) False selenoi
XR_005052757.1 mRNA downstream 49637 1976310 ~ 2021626 (-) True selenoi
XR_002474348.2 mRNA downstream 100799 1968290 ~ 1970464 (-) False LOC110529244
XM_036984537.1 mRNA downstream 242869 1807585 ~ 1828394 (-) True tbx18
XM_036984534.1 mRNA downstream 572563 1479450 ~ 1498700 (-) False armc1l
XM_036984552.1 mRNA upstream 38473 2110060 ~ 2199868 (-) False LOC110531067
XM_036984551.1 mRNA upstream 38473 2110060 ~ 2200906 (-) False LOC110531067
XM_036984554.1 mRNA upstream 38473 2110060 ~ 2200906 (-) False LOC110531067
XM_036984548.1 mRNA upstream 38473 2110060 ~ 2200907 (-) False LOC110531067
XM_036984549.1 mRNA upstream 38473 2110060 ~ 2200907 (-) False LOC110531067
TU756703 other downstream 76733 1993889 ~ 1994530 (-) True G664733
TU755950 other downstream 572692 1480175 ~ 1498571 (-) True armc1l
TU755929 other downstream 632822 1437760 ~ 1438441 (-) True G664089
TU754888 other downstream 1641005 428191 ~ 430258 (-) True G663235
TU754858 other downstream 1684281 381322 ~ 386982 (-) False G663215
TU756738 other upstream 219815 2291402 ~ 2350981 (-) True G664763
TU757795 other upstream 1165301 3236888 ~ 3240052 (-) True G665603
TU757859 other upstream 1268469 3340056 ~ 3340960 (-) True G665655
TU757924 other upstream 1345526 3417113 ~ 3418288 (-) True G665718
TU758017 other upstream 1449203 3520790 ~ 3521623 (-) True G665797

Expression Profile