RNA id: TCONS_00035411


Basic Information

Item Value
RNA id TCONS_00035411
length 1378
RNA type mRNA
GC content 0.37
exon number 7
gene id XLOC_017963
representative False

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 14003060 ~ 14012859 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGATACTTTTTGTGTGTGACGTAAAATAAGATGGCCGCGCAGTGGTGTTTATGTTATTGATACGCATGAACCGATCATAGAAATGAAAAACAAGCGTTTATTTTCACCGCagtttattttcagaaaggaatatattcagatcagtttatcaggctgatttttgtgtttttgtagtgGTCGGAAGGATACGACACATCATAAACATGtcTGCAAAAGTGAACGCCACGGAGAGAAGTGAGTCGAGTACAAAAAGCAGAAGACGGTCTAACAGCAGAGGTAGAGAAAACCGCAAACGGGCAAGAAGCAGAAGCAGATCTTCCTCCTCATCATCCAGTTCTtcgtcttcctcctcctcttcttcctcttcctcctcttcttcttcacgATCGTCATCTAGCAGTTCTTCATCACACAGTATCTCCAGCTCCAGTGGCTCAGATTCTTGCAAAAAGCGAGGGAAATCTTCAAAGAAAAGTAAAGAGAAACACGGCAAAAAGaAAAGAACAAAAGAGAAGACACGCAAGAAGAAAAAGGAAAAGGGCCACAAAGGGCAGGACGAGAGCTCTGGACCTGTTCAAATTTCAAagTATCTTAAGGAAAAGAAGAAAAGTGGCAAGTACAGCATGATTTCaggaaaaaagattaaaatgaaagtaaaaaagtcAAAGAAGGACAAGCAGAGGGATAAGAACAGAGCGGAGCTGCTGGATTTCTTAAACTCCACCTACTGATTCAGTCCAGACCCAGAaccattgttattattttgtttgtttgcattattCACCTGACAGTCACTCAGGGAAAGACCATCTTGAAACAATAATATTGTTGCCTGAAATTATACATGGACAGATCCTCAACATTAATCATTTATGTTGACAAcagttgcttttattttagttttttattattattccagaCTATATAAActgaaacatttgtatttttacatcTTAATTGTACCCCAATAGAACTGTAGCTTGGATGTAACATTGTTACATGTTACTGAAAttgtaaaagaaaaataagtattcttgtatttttatttttaaatgcatatctCCAGTAAGCAAGAATGAATCGGTCCGGATTTGTTCTAAAAGATGCAGAAAGAGGATTAATGTCTGAGCGGCTGATTCATGAAGGTTTTACATTATATTTCTATGTGAAGCTTTTTGGAAAATCTTTGAATCGGCATTCGTGGTTGTGTCCTTGCAGTTGTGTTTTTCTTGTTATCCCTGATAATCTGTGTATTTACTGTGTAGATGAGCAGCTGATAATCTGCCTTTGAGTCACGTGCATCCTACCGTACTGATGACAATACTGTTAAATAAACTTACAATCTGTGTCTTTGTGTATTAAAAGAGGTTTGATGCCA

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-143 No description available

Ensembl:

ensembl_id ENSDART00000152429

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036811 lncRNA downstream 2059 13998311 ~ 14001001 (-) True XLOC_017962
TCONS_00035410 lncRNA downstream 106388 13894918 ~ 13896672 (-) True XLOC_017961
TCONS_00035405 lncRNA downstream 343627 13654585 ~ 13659433 (-) False XLOC_017958
TCONS_00036810 lncRNA downstream 690050 13309282 ~ 13313010 (-) False XLOC_017953
TCONS_00036809 lncRNA downstream 690050 13309282 ~ 13313010 (-) True XLOC_017953
TCONS_00035414 lncRNA upstream 13994 14026853 ~ 14027677 (-) False XLOC_017964
TCONS_00035415 lncRNA upstream 14455 14027314 ~ 14028035 (-) True XLOC_017964
TCONS_00035424 lncRNA upstream 447240 14460099 ~ 14462995 (-) True XLOC_017969
TCONS_00035436 lncRNA upstream 860171 14873030 ~ 14873330 (-) True XLOC_017973
TCONS_00036458 lncRNA upstream 1072227 15085086 ~ 15086084 (-) True XLOC_017976
TCONS_00035407 mRNA downstream 228234 13750537 ~ 13774826 (-) False XLOC_017959
TCONS_00035408 mRNA downstream 237311 13754869 ~ 13765749 (-) True XLOC_017959
TCONS_00035406 mRNA downstream 280546 13673384 ~ 13722514 (-) True XLOC_017958
TCONS_00035403 mRNA downstream 329494 13647987 ~ 13673566 (-) False XLOC_017958
TCONS_00035402 mRNA downstream 342293 13647987 ~ 13660767 (-) False XLOC_017958
TCONS_00035413 mRNA upstream 1954 14014813 ~ 14054083 (-) False XLOC_017964
TCONS_00035416 mRNA upstream 83999 14096858 ~ 14114078 (-) False XLOC_017965
TCONS_00035417 mRNA upstream 85211 14098070 ~ 14114151 (-) True XLOC_017965
TCONS_00035418 mRNA upstream 131430 14144289 ~ 14206698 (-) False XLOC_017966
TCONS_00035419 mRNA upstream 134475 14147334 ~ 14259032 (-) True XLOC_017966
TCONS_00035409 other downstream 184550 13818395 ~ 13818510 (-) True XLOC_017960
TCONS_00035395 other downstream 633717 13369227 ~ 13369343 (-) True XLOC_017955
TCONS_00035393 other downstream 794308 13204066 ~ 13208752 (-) True XLOC_017952
TCONS_00035389 other downstream 862833 13020489 ~ 13140227 (-) False XLOC_017951
TCONS_00035387 other downstream 1395639 12605718 ~ 12607421 (-) True XLOC_017943
TCONS_00035421 other upstream 442049 14454908 ~ 14455626 (-) True XLOC_017968
TCONS_00035480 other upstream 3629950 17642809 ~ 17642923 (-) True XLOC_017998
TCONS_00035481 other upstream 3771588 17784447 ~ 17784568 (-) True XLOC_017999
TCONS_00035486 other upstream 4341550 18354409 ~ 18382352 (-) False XLOC_018004
TCONS_00035494 other upstream 4761270 18774129 ~ 18776493 (-) False XLOC_018010

Expression Profile

//