RNA id: TU761193


Basic Information

Item Value
RNA id TU761193
length 490
lncRNA type inter_gene
GC content 0.37
exon number 3
gene id G668349
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 6425400 ~ 6426248 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GAGTAGCATAAgcctatcagtgtgtgtgtatcgaGAGACACTGTCAGTTGTGGCGTCACTACCAAAATCACCATCAACATTACTATCAACATCACTATCAACATCACTATCAACATCACTATCAACATCACTACCAACATCACTACCAACATCACTATCAACATCACTACCAACATCACTACCAACATCACTATCAACATCACTACCAACATCACTACCAACATCACTATAAACATCACTACTAACATCATTATCAACATCATTATCAACATCACTACCAATATCTCTACCAACATCACTACCAACATCTCTACTAACATCATTACCAACATCATTATCAACATCACTACCAACATCACTATCAACATCACCACCAACATCATTATCAACATCACTACCAACATCACTACCAACATCTCTACTAACATCATTATCAACATCATTATCAACATCACTACCAACATCACTATCAACATCACTACTAACATCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU761155 lncRNA downstream 68852 6356279 ~ 6356548 (-) True G668320
TU761148 lncRNA downstream 89183 6335636 ~ 6336217 (-) True G668315
TU761141 lncRNA downstream 98174 6326939 ~ 6327226 (-) True G668309
TU761136 lncRNA downstream 104367 6320785 ~ 6321033 (-) True G668304
TU761028 lncRNA downstream 181147 6240038 ~ 6244253 (-) True G668212
TU761202 lncRNA upstream 8684 6434932 ~ 6435770 (-) True G668357
TU761208 lncRNA upstream 15316 6441564 ~ 6441775 (-) True G668363
TU761273 lncRNA upstream 87713 6513961 ~ 6514176 (-) True G668417
TU761292 lncRNA upstream 109120 6535368 ~ 6535606 (-) True G668434
TU761338 lncRNA upstream 136755 6563003 ~ 6590466 (-) True G668474
XM_021611414.2 mRNA downstream 380474 5938942 ~ 6044926 (-) False LOC110529295
XM_036984625.1 mRNA downstream 685829 5649496 ~ 5739571 (-) True LOC110529170
XM_036986817.1 mRNA downstream 714279 5710145 ~ 5711121 (-) True LOC118965593
XM_036984624.1 mRNA downstream 755451 5649496 ~ 5669949 (-) False LOC110529170
XM_036986816.1 mRNA downstream 838765 5583845 ~ 5586635 (-) False si:dkey-229d11.5
XM_021611408.2 mRNA upstream 269734 6695982 ~ 6717482 (-) False LOC110529288
XM_021611407.2 mRNA upstream 269734 6695982 ~ 6717783 (-) True LOC110529288
LOC118965487 mRNA upstream 333152 6759400 ~ 6761544 (-) False LOC118965487
XM_036984634.1 mRNA upstream 360129 6786377 ~ 6800030 (-) False wdr21
XM_036984632.1 mRNA upstream 360129 6786377 ~ 6801226 (-) False wdr21
TU761008 other downstream 141379 6206558 ~ 6284021 (-) True G668192
TU761057 other downstream 143760 6280196 ~ 6281640 (-) True G668238
TU760267 other downstream 874155 5548803 ~ 5551245 (-) True znf395b
TU759716 other downstream 1935180 4488806 ~ 4490220 (-) True G667122
TU758186 other downstream 2755253 3668232 ~ 3670147 (-) True G665927
TU761993 other upstream 360284 6786532 ~ 6794187 (-) True wdr21
TU762099 other upstream 563602 6989850 ~ 6991612 (-) False G669087
TU762102 other upstream 563602 6989850 ~ 6991612 (-) False G669087
TU762103 other upstream 563602 6989850 ~ 6991612 (-) False G669087
TU762107 other upstream 563602 6989850 ~ 6991612 (-) False G669087

Expression Profile