RNA id: TU760267



Basic Information


Item Value
RNA id TU760267
length 635
RNA type TUCP
GC content 0.55
exon number 3
gene id znf395b
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 5535756 ~ 5551550 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AGCAAGGCAGACCCGGTGGAGACGTCCACTTTACTCATTCTCCTAACGGGACACAACAGACTCCATCGCTCTAACGggaATAGAGACTGTACAGGACTGTTGAGGACTGTTGAGGACTGTACAGTGCAGACCACCAGCACTACCAGCGGCAGCACCATGGCAACCAAGAGACCAGGGGAGAGGACCTCTCCGGCAGCCGGACCCACAGACACCAGGCAGTCTGGAGCAGAGATACAGGAGACACTGgtATACATGCAGTGCTGTGGGCAGGAAGCCCCTAACATGACAGAGAGCAACGGCCATAGGAACATTATGAATAGGCACCATCAGGTACCGGTCTTCGTGCCCCGGGGGAGGACTGAGGCGGGCTGGACCCACCCTGCGGCTCCTCAGCAGACTACAACTCCCACAGTGCCCTCCTGCCCTGTGTCTGCCCCAGACAGGTAAGCTCTCTCTCTATGTGGTCATCCTTCAGCCTAAAGCTGACCTTCAACTTACAACGTCAACCGTTATCTTGGTACTCCTCAATGAATTCTCAGTTATTCACCTGCTCCTCCTCGTTGACTTGTCTCTGTAAGTGGAGAGACATCTGGGGCACCATCATACATCACTCAAAGCCCCAAATAAACCCCAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU760268 lncRNA downstream 7951 5535777 ~ 5540852 (-) False znf395b
TU760266 lncRNA downstream 16217 5531329 ~ 5532586 (-) True G667566
TU760274 lncRNA downstream 20926 5527602 ~ 5527877 (-) True G667574
TU760263 lncRNA downstream 31006 5517554 ~ 5517797 (-) True G667564
TU760260 lncRNA downstream 33666 5514919 ~ 5515137 (-) True G667561
TU760277 lncRNA upstream 11228 5562473 ~ 5564029 (-) False G667577
TU760278 lncRNA upstream 11228 5562473 ~ 5564827 (-) False G667577
TU760279 lncRNA upstream 11652 5562897 ~ 5564029 (-) True G667577
TU760283 lncRNA upstream 22633 5573878 ~ 5574450 (-) True G667580
TU760305 lncRNA upstream 33825 5585070 ~ 5585549 (-) True si:dkey-229d11.5
XM_036984611.1 mRNA downstream 98463 5364219 ~ 5450340 (-) False LOC110529167
XM_036984612.1 mRNA downstream 98463 5364219 ~ 5450340 (-) True LOC110529167
XM_036984609.1 mRNA downstream 186121 5344512 ~ 5362682 (-) False LOC110529166
XM_036984610.1 mRNA downstream 186121 5344512 ~ 5362682 (-) True LOC110529166
XM_036984607.1 mRNA downstream 344381 5187359 ~ 5204422 (-) True LOC110529164
XM_036986816.1 mRNA upstream 32600 5583845 ~ 5586635 (-) False si:dkey-229d11.5
XM_036984624.1 mRNA upstream 98251 5649496 ~ 5669949 (-) False LOC110529170
XM_036984625.1 mRNA upstream 98251 5649496 ~ 5739571 (-) True LOC110529170
XM_036986817.1 mRNA upstream 158900 5710145 ~ 5711121 (-) True LOC118965593
XM_021611414.2 mRNA upstream 387697 5938942 ~ 6044926 (-) False LOC110529295
TU759716 other downstream 1058583 4488806 ~ 4490220 (-) True G667122
TU758186 other downstream 1878656 3668232 ~ 3670147 (-) True G665927
TU758017 other downstream 2027180 3520790 ~ 3521623 (-) True G665797
TU757924 other downstream 2130515 3417113 ~ 3418288 (-) True G665718
TU757859 other downstream 2207843 3340056 ~ 3340960 (-) True G665655
TU761008 other upstream 655313 6206558 ~ 6284021 (-) True G668192
TU761057 other upstream 728951 6280196 ~ 6281640 (-) True G668238
TU761993 other upstream 1235287 6786532 ~ 6794187 (-) True wdr21
TU762099 other upstream 1438605 6989850 ~ 6991612 (-) False G669087
TU762102 other upstream 1438605 6989850 ~ 6991612 (-) False G669087

Expression Profile