Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU760305 |
| length | 288 |
| lncRNA type | sense_over |
| GC content | 0.63 |
| exon number | 2 |
| gene id | si:dkey-229d11.5 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 5583845 ~ 5586635 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU760283 | lncRNA | downstream | 10620 | 5573878 ~ 5574450 (-) | True | G667580 |
| TU760278 | lncRNA | downstream | 20243 | 5562473 ~ 5564827 (-) | False | G667577 |
| TU760277 | lncRNA | downstream | 21041 | 5562473 ~ 5564029 (-) | False | G667577 |
| TU760279 | lncRNA | downstream | 21041 | 5562897 ~ 5564029 (-) | True | G667577 |
| TU760268 | lncRNA | downstream | 44218 | 5535777 ~ 5540852 (-) | False | znf395b |
| TU760296 | lncRNA | upstream | 14976 | 5600525 ~ 5629477 (-) | True | G667587 |
| TU760568 | lncRNA | upstream | 58317 | 5643866 ~ 5644318 (-) | True | G667822 |
| TU760595 | lncRNA | upstream | 67081 | 5652630 ~ 5653181 (-) | True | G667835 |
| TU760596 | lncRNA | upstream | 70257 | 5655806 ~ 5697310 (-) | True | G667836 |
| TU760589 | lncRNA | upstream | 171220 | 5756769 ~ 5789165 (-) | False | G667829 |
| XM_036984619.1 | mRNA | downstream | 33520 | 5535756 ~ 5551550 (-) | False | znf395b |
| XM_036984617.1 | mRNA | downstream | 33521 | 5535756 ~ 5551549 (-) | False | znf395b |
| XM_036984616.1 | mRNA | downstream | 33526 | 5535756 ~ 5551544 (-) | False | znf395b |
| XM_036984618.1 | mRNA | downstream | 33534 | 5535756 ~ 5551536 (-) | False | znf395b |
| XM_036984612.1 | mRNA | downstream | 134730 | 5364219 ~ 5450340 (-) | True | LOC110529167 |
| XM_036984624.1 | mRNA | upstream | 63947 | 5649496 ~ 5669949 (-) | False | LOC110529170 |
| XM_036984625.1 | mRNA | upstream | 63947 | 5649496 ~ 5739571 (-) | True | LOC110529170 |
| XM_036986817.1 | mRNA | upstream | 124596 | 5710145 ~ 5711121 (-) | True | LOC118965593 |
| XM_021611414.2 | mRNA | upstream | 353393 | 5938942 ~ 6044926 (-) | False | LOC110529295 |
| XM_021611408.2 | mRNA | upstream | 1110433 | 6695982 ~ 6717482 (-) | False | LOC110529288 |
| TU760267 | other | downstream | 33825 | 5548803 ~ 5551245 (-) | True | znf395b |
| TU759716 | other | downstream | 1094850 | 4488806 ~ 4490220 (-) | True | G667122 |
| TU758186 | other | downstream | 1914923 | 3668232 ~ 3670147 (-) | True | G665927 |
| TU758017 | other | downstream | 2063447 | 3520790 ~ 3521623 (-) | True | G665797 |
| TU757924 | other | downstream | 2166782 | 3417113 ~ 3418288 (-) | True | G665718 |
| TU761008 | other | upstream | 621009 | 6206558 ~ 6284021 (-) | True | G668192 |
| TU761057 | other | upstream | 694647 | 6280196 ~ 6281640 (-) | True | G668238 |
| TU761993 | other | upstream | 1200983 | 6786532 ~ 6794187 (-) | True | wdr21 |
| TU762099 | other | upstream | 1404301 | 6989850 ~ 6991612 (-) | False | G669087 |
| TU762102 | other | upstream | 1404301 | 6989850 ~ 6991612 (-) | False | G669087 |
