RNA id: TU763909



Basic Information


Item Value
RNA id TU763909
length 671
lncRNA type inter_gene
GC content 0.42
exon number 4
gene id G670582
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 8640267 ~ 8641751 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


agagaaacatggagaaagacaaacagagagacagagagaaacagggagaaagacaatcagagagacagagaaccagggagaaagacaaacagagagacagagagaaacagtgacgtaccaacggagagacagagagaaacagggagaaagacaaacagagagacagggagaaagacaaacagagagacagggagaaacagggagaaagacaaacagagagacagagagaaacagggagaaagacaaacagaaaaacagagagaaacagggaaaaagacaaagagagagacagagagaaacaggtagaaagacaaatagaaaaacagagagaaacagggagaaagacaaacagagaaacagggagaaagacaaagagagagacagagagaaacagggagaaagacaaacagagaaacagggagaaagacaaacagaaaaacagagagaaacagggagaaagacaaacagagaaacagagagaaacagggagaaagacaaacagagaaacagggagaaagacaaagagagagacagagagaaacagggagaaagacaaacagagaaacagagagaaacagggagaaagacaaacagagagacagagataaacagggagaaagacaaacagaaaaacagagagaaacagggagaaagacaaacagaaaaacaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU763477 lncRNA downstream 132173 8507894 ~ 8508094 (-) True G670210
TU763464 lncRNA downstream 151262 8488763 ~ 8489005 (-) True G670197
TU763457 lncRNA downstream 156921 8483056 ~ 8483346 (-) True G670190
TU763454 lncRNA downstream 159681 8480366 ~ 8480586 (-) True G670187
TU763436 lncRNA downstream 173309 8466592 ~ 8466958 (-) True G670170
TU763897 lncRNA upstream 69067 8710818 ~ 8731846 (-) True LOC110529319
TU763958 lncRNA upstream 104364 8746115 ~ 8747161 (-) True G670628
TU763967 lncRNA upstream 114530 8756281 ~ 8757422 (-) True G670635
TU763970 lncRNA upstream 121494 8763245 ~ 8763829 (-) True G670638
TU763971 lncRNA upstream 122287 8764038 ~ 8764260 (-) True G670639
LOC118965604 mRNA downstream 72547 8565390 ~ 8567720 (-) True LOC118965604
XM_036984667.1 mRNA downstream 264007 8363464 ~ 8376260 (-) True LOC110529317
XM_021611436.2 mRNA downstream 282586 8344022 ~ 8357681 (-) True LOC110529314
XM_021611437.2 mRNA downstream 282678 8344022 ~ 8357589 (-) False LOC110529314
XM_036984666.1 mRNA downstream 283160 8344022 ~ 8357107 (-) False LOC110529314
XM_036984672.1 mRNA upstream 43609 8685360 ~ 8711278 (-) False LOC110529319
XM_036984671.1 mRNA upstream 43609 8685360 ~ 8731870 (-) False LOC110529319
XM_021611457.2 mRNA upstream 116330 8758081 ~ 8862989 (-) False LOC110529325
XR_005052769.1 mRNA upstream 116330 8758081 ~ 8862989 (-) False LOC110529325
XR_005052770.1 mRNA upstream 116330 8758081 ~ 8862989 (-) False LOC110529325
TU763857 other downstream 62487 8577051 ~ 8577780 (-) True G670549
TU763341 other downstream 298147 8340990 ~ 8342120 (-) True G670097
TU763125 other downstream 529309 8107871 ~ 8110958 (-) True G669918
TU762377 other downstream 1222032 7416025 ~ 7418235 (-) True G669281
TU762376 other downstream 1226031 7401464 ~ 7414236 (-) True LOC110529302
TU764088 other upstream 314342 8956093 ~ 8961731 (-) True G670733
TU764280 other upstream 622099 9263850 ~ 9265093 (-) True G670905
TU764524 other upstream 704633 9346384 ~ 9347879 (-) True G671122
TU765218 other upstream 1329931 9971682 ~ 9972812 (-) False kif26aa
TU765219 other upstream 1329931 9971682 ~ 9972812 (-) False kif26aa

Expression Profile